Pairwise Alignments

Query, 954 a.a., glycine dehydrogenase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 526 a.a., glycine cleavage system protein P, C-terminal domain from Caulobacter crescentus NA1000

 Score =  305 bits (782), Expect = 4e-87
 Identities = 182/425 (42%), Positives = 237/425 (55%), Gaps = 28/425 (6%)

Query: 469 PIFHMNRAEAEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATVEMLPLTWPEFANLHPF 528
           PI     +E E  R+  RL+ ++ A+D A+ PLGSCTMK N  +       P F+++HP 
Sbjct: 70  PIGLPGLSEPETVRHYVRLSQKNHAIDLALYPLGSCTMKHNPRLNEKMARLPGFSDIHPL 129

Query: 529 APADQAAGYHEMIAELSQMLCDVTGYDAMSMQPNSGAQGEYAGLLAIRGYHRARGEGHRN 588
            P     G  E++  L+  L  +TG  A+++ P +GA GE  GLLAIR  H A G GHR 
Sbjct: 130 QPQSTVQGALELMDRLAHWLKTLTGMPAVALTPKAGAHGELCGLLAIRAAHEAAGNGHRK 189

Query: 589 ICLIPTSAHGTNPASAQMVGWKVVVVKSAENGDIDLEDFRAKAEQHSENLAGCMITYPST 648
             L PTSAHGTNPA+A  VG+ VV +   E+G +DL D  +K   H   +A  M+T P+T
Sbjct: 190 TVLAPTSAHGTNPATAAFVGYTVVEIAQTEDGRVDLADLESKLGDH---VAAIMVTNPNT 246

Query: 649 HGVFEEIVREVCDITHAHGGQVYIDGANMNAMVGLSAPGDLGGDVSHLNLHKTFCIPHGG 708
            G+FE  V E+  +THA G   Y DGAN NA+VG   PGDLG D  H+NLHKTF  PHGG
Sbjct: 247 CGLFERDVVEIARLTHAAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFSTPHGG 306

Query: 709 GGPGMGPIGVKAHLAPHLPS---------HATATGAGFGDAGAV---ASAAYGSPSILTI 756
           GGPG GP+ +   LAP  P+            A  AG  DA       SA +G   +   
Sbjct: 307 GGPGAGPVVLSEALAPFAPTPWLTHGDNGFELAEHAGDDDAKTAFGRMSAFHGQMGMYVR 366

Query: 757 SYAYCLLMGGAGLTQATKVAILNANYMAKRL----SAGFPILYANDKGRVAHECILDTRV 812
           +YAY L  G  GL Q  + A+LNANY+  +L    S  FP      +G   HE + D   
Sbjct: 367 AYAYMLSHGADGLRQVAEDAVLNANYIKAQLKDVMSPAFP------EGPCMHEALFDDSW 420

Query: 813 LDKIAGVTVEDVAKRLMDCGFHAPTMSWP--VAGTLMVEPTESEPKAELDRFCDAMLAIR 870
           L+   GVT  D AK ++D GFH  TM +P  V G +++EPTE+E K ELDRF  A+ A+ 
Sbjct: 421 LEG-TGVTTLDFAKAMIDEGFHPMTMYFPLVVHGAMLIEPTETESKHELDRFIAALRALA 479

Query: 871 EEADA 875
             A A
Sbjct: 480 GAAKA 484



 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 79/330 (23%), Positives = 129/330 (39%), Gaps = 27/330 (8%)

Query: 49  GIRRRDPLAFGPALSERDTLHRMRELADKNTVLT-SLIGQGYHGTHTPPVILRNILENPA 107
           G+ R  P+   P LSE +T+     L+ KN  +  +L   G       P +   +   P 
Sbjct: 64  GLLRDAPIGL-PGLSEPETVRHYVRLSQKNHAIDLALYPLGSCTMKHNPRLNEKMARLPG 122

Query: 108 WYTAYTPYQPEIS-QGRLEALLNFQTMMADLTGLPIANASLLDEGTAAAE-----AMAMA 161
           +   + P QP+ + QG LE +      +  LTG+P    +L  +  A  E     A+  A
Sbjct: 123 FSDIH-PLQPQSTVQGALELMDRLAHWLKTLTGMPAV--ALTPKAGAHGELCGLLAIRAA 179

Query: 162 QRASKSKARGFFVAEDCHPQTIDVIRTRAEPLGIEVIV---GAVDALDPEA-----VFAA 213
             A+ +  R   +A      T            +E+     G VD  D E+     V A 
Sbjct: 180 HEAAGNGHRKTVLAPTSAHGTNPATAAFVGYTVVEIAQTEDGRVDLADLESKLGDHVAAI 239

Query: 214 LFQYPGSYG-HVRDYSDVIEALHGARALAVV-AADPLALTLLKSPGEMGAD-IAIGSTQR 270
           +   P + G   RD  ++    H A A      A+  A+     PG++G D + I   + 
Sbjct: 240 MVTNPNTCGLFERDVVEIARLTHAAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKT 299

Query: 271 FGVPMGYGGPHAAYMTCTDALKRSMPGRIIGVSVDARGNKAYRLSLQTREQHIRREKANS 330
           F  P G GGP A  +  ++AL    P   +       G+  + L+    +   +      
Sbjct: 300 FSTPHGGGGPGAGPVVLSEALAPFAPTPWL-----THGDNGFELAEHAGDDDAKTAFGRM 354

Query: 331 NVCTAQALLAVMASMYGVFHGPDGLKAIAQ 360
           +    Q  + V A  Y + HG DGL+ +A+
Sbjct: 355 SAFHGQMGMYVRAYAYMLSHGADGLRQVAE 384