Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 865 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 72.0 bits (175), Expect = 9e-17
 Identities = 83/295 (28%), Positives = 124/295 (42%), Gaps = 34/295 (11%)

Query: 223 WQAEHKWDGIRGQLILRGGQHFVWSRGEELMTDRFPELAA-LRDFLPDGTVLDGELLAWD 281
           W  E K+DG R    +  G    ++R     T++FP +AA L +      ++DGE++A  
Sbjct: 258 WLNEAKFDGYRLVCAVGAGTVRCYTRNGLDWTEKFPAIAAALAELDCQSALIDGEVVALS 317

Query: 282 YNGAGDAPLPFNALQKRIGRKTVPKKLLSEAPVILRAYDLLEDGGTDLRDRPLSERRARL 341
             G+      F+ALQK          L + A   L A+DL+E  G DL  +PL ER+ RL
Sbjct: 318 EGGS-----TFSALQKA---------LRTGASTRLYAFDLIELDGKDLSRKPLVERKERL 363

Query: 342 EALAAALPDTLPLRLSPTLTFDSWDALAQIRAKSREMGAEGIMLKRRASPYLAGRKKGDW 401
           EAL   L  T  ++ S  +  +    L+ I     + G EGI+ K   +PY +GR +  W
Sbjct: 364 EALLQTLGATSTVQFSEHVRGNGEHVLSAI----CKAGQEGIIAKEADAPYRSGRSR-SW 418

Query: 402 WKWKVDPLTIDAVMIYAQAGHGRRANLFTDYTFAVWDGNELVPFTKAYSGLTDAEFRQIT 461
            K K        +  Y  +    RA  F       ++G +L+      +G +      + 
Sbjct: 419 LKVKCTKRQEFVIGGYTPSSKKGRA--FASLLVGTFEGGKLIYRGGVGTGFSGKTMEDLA 476

Query: 462 AWV--RKNTLERFGPVRR--------VTPEHVFEIAFEGIQAS--PRHKSGVALR 504
           A    RK     F  V R        + P+ V E+ F    A    RH S   LR
Sbjct: 477 AAFAKRKRDTSPFDSVPRERMRNSVWLEPDLVAEVDFAEFTADGHVRHGSFEGLR 531