Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 66/186 (35%), Positives = 91/186 (48%), Gaps = 20/186 (10%)

Query: 219 PPA--DWQAEHKWDGIRGQLILRGGQHFVWSRGEELMTDRFPELAALRDFLPDGTVLDGE 276
           PPA  DW  E K+DG R Q+ +  G+  + +R     T ++PE+A     LPD  ++DGE
Sbjct: 258 PPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPEIADAASELPD-CIIDGE 316

Query: 277 LLAWDYNGAGDAPLPFNALQKRIGRKTVPKKLLSEAPVILRAYDLLEDGGTDLRDRPLSE 336
           + A D NGA D    F ALQ  +              ++  A+DLL DGG DLR   L E
Sbjct: 317 ICALDDNGAPD----FAALQAALSEGKTGN-------LVYFAFDLLFDGGEDLRSMRLVE 365

Query: 337 RRARLEALAAALPDTLPLRLSPTLTFDSWDALAQIRAKSREMGAEGIMLKRRASPYLAGR 396
           R+ RLE   AA  D   +R          DA+ +   K   +  EGI+ K+  +PY +GR
Sbjct: 366 RKKRLEDFLAAGSDDPRIRYVDHFE-SGGDAVLRSACK---LSLEGIVSKQMDAPYQSGR 421

Query: 397 KKGDWW 402
              D W
Sbjct: 422 T--DTW 425