Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 818 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 62.4 bits (150), Expect = 6e-14
 Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 22/190 (11%)

Query: 220 PADWQAEHKWDGIRGQLILRGGQHFVWSRGEELMTDRFPELAALRDFLP-DGTVLDGELL 278
           P  W  E K+DG R    +  G+  + +RG    T R+ +L  +   LP    ++DGE++
Sbjct: 237 PERWLHEIKFDGYRTMAHVADGKVRLVTRGGLDWTKRYGDLPEVFRRLPCRDVIIDGEIV 296

Query: 279 AWDYNGAGDAPLPFNALQKRIGRKTVPKKLLSEAPVILRAYDLLEDGGTDLRDRPLSERR 338
             D  G     L  +AL    G             ++  A+DLL   G +L D PL +R+
Sbjct: 297 VLDETGVSRFALLQDALSTGAGNS-----------LVFYAFDLLHLNGWNLFDVPLEKRK 345

Query: 339 ARLEALAAALPDTLPLRLSPTLTFDSWDALAQIRA---KSREMGAEGIMLKRRASPYLAG 395
           A L+ L A    +        + F     L + RA   ++ EMG EGI+ KR ++PY +G
Sbjct: 346 ALLKQLLAGQVSS-----RSAIQFSD-HVLGEGRALYDRASEMGLEGIVSKRISAPYRSG 399

Query: 396 RKKGDWWKWK 405
           R K  W K K
Sbjct: 400 RSK-TWTKTK 408