Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 93/315 (29%), Positives = 136/315 (43%), Gaps = 42/315 (13%)

Query: 223 WQAEHKWDGIRGQLILRGGQHFVWSRGEELMTDRFPELAA-LRDFLPDGTVLDGELLAWD 281
           WQ E KWDG R      G +  + ++  + +   FPE+ A LR   PD  VLDGEL+   
Sbjct: 48  WQYEPKWDGFRCLAFKSGDEVDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGELVI-- 105

Query: 282 YNGAGDAPLPFNALQKRI-GRKTVPKKLLSEAPVILRAYDLLE-DGGTDLRDRPLSERRA 339
                D  L F+ALQ R+    +  +KL  E P  L  +D+L    GT L   PL  RRA
Sbjct: 106 ---EVDGRLSFDALQMRLHPAASRVQKLSQETPAKLILFDMLAGTDGTILTGEPLQTRRA 162

Query: 340 RLEALAAALPDTLPLRLSPTLTFDSWDALAQIRAKSREMGA-EGIMLKRRASPYLAGRKK 398
            LEA A        L  SP  T D  +A   +   S E GA +G++ KRR   Y  G + 
Sbjct: 163 CLEAFAKKNAVAEMLESSP-FTLDIKEAERWL--TSWEAGATDGVVAKRRDGVYECGERA 219

Query: 399 GDWWKWKVDPL-TIDAVMIYAQAGHGRRANLFTDYTFAVWDGNELVPFTKAYSGLTDAEF 457
                 KV  L T D V+      +   ++L       ++D   L+      + ++D E 
Sbjct: 220 ----MVKVKRLKTADCVV--GGFRYESDSSLVGSLLLGLYDTEGLLNHVGFTATISDKER 273

Query: 458 RQITAWVR-----------------KNTLERFGPVRRVTPEHVFEIAFEGIQASPRHKSG 500
             +T  +                  + + ER G    V PE V E+ F+ + ++ R + G
Sbjct: 274 PALTNQLEALREPPGFTGKAPGGPSRWSSERSGEWEPVRPELVVEVRFDHV-SNRRFRHG 332

Query: 501 VALRFPRMLRWRKDK 515
                 +++RWR DK
Sbjct: 333 T-----KLMRWRPDK 342