Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score =  121 bits (304), Expect = 6e-32
 Identities = 96/324 (29%), Positives = 157/324 (48%), Gaps = 18/324 (5%)

Query: 224 QAEHKWDGIRGQLILRGGQHFVWSRGEELMTDRFPELAA-LRDFLPDGTVLDGELLAWDY 282
           Q E K+DG R Q+    G   ++SR  E +T+  PEL   ++    D  +L+GE +A D 
Sbjct: 248 QFETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGECVAMDL 307

Query: 283 NGAGDAPLPFNALQKRIGRKTVPKKLLSEAPVILRAYDLLEDGGTDLRDRPLSERRARLE 342
           +     P PF  + +R  RK    K+  +  + +  +D+L      L D PL  RR  LE
Sbjct: 308 DSG--KPRPFQDILRRFRRKYNIDKMAEKIALRIYFFDVLYYN-RGLIDTPLKTRREILE 364

Query: 343 ALAAA------LPDTLPLRLSPTLTFDSW-------DALAQIRAKSREMGAEGIMLKRRA 389
            L         L        S  + F S+       + + +    S  +G EGIM+K   
Sbjct: 365 KLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKNPD 424

Query: 390 SPYLAGRKKGDWWKWKVDPLTIDAVMIYAQAGHGRRANLFTDYTFAVWDGN-ELVPFTKA 448
           +PY  G +    +K K     +D V+  A+ G G+R + +  Y  +V D +  L      
Sbjct: 425 APYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKDNDGNLHVIGNV 484

Query: 449 YSGLTDAEFRQITAWVRKNTLERFGPVRRVTPEHVFEIAFEGIQASPRHKSGVALRFPRM 508
            SGLT+ +  ++T  V +  +E  G    + P+ V E+ +E IQ S +++ G ALRFPR+
Sbjct: 485 GSGLTEDDLEKLTKIVNEIKIEDLGEEVILEPKIVLEVTYEEIQTSEKYEMGYALRFPRV 544

Query: 509 LRWRKDKPLQEANTLEDLKGMLEV 532
           ++ R+DK + + NTL+D+K + E+
Sbjct: 545 VQIREDKSINDINTLDDVKKIYEI 568