Pairwise Alignments

Query, 231 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 261 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  125 bits (313), Expect = 1e-33
 Identities = 72/178 (40%), Positives = 99/178 (55%), Gaps = 1/178 (0%)

Query: 6   EVHGVSQRRAGKALAVDRSSVRYRSV-RPDDAEARAAMKAVAAERRRFGYRRIHVMLERQ 64
           E+  +S+RRA +   + R + R+     P      A +  +A  RRRFGYRR+H +L  +
Sbjct: 76  ELTSISERRACRLAGISRDAFRHAPTPTPATQTLSARLVELAQARRRFGYRRLHDLLRPE 135

Query: 65  GIMMNLKKLRRLYREEKLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDGRQ 124
              +N KK+ RLYRE KL VRRR   K     R P+     PN+  S+DFV D L  GR+
Sbjct: 136 FPQVNHKKIYRLYREAKLSVRRRKKAKFPAAQRQPLRPARHPNEVISMDFVFDQLASGRR 195

Query: 125 FRVLAVVDDYSRECLALVADTSLSGLRVVRELDALMLRRGQPAMVVSDNGTELTSVAV 182
            + L V DD++ EC+ +  D  +SG  VVR L+ +   RG P  V +DNG E TS AV
Sbjct: 196 IKCLTVADDFTHECVDIAVDHGISGAYVVRVLEQIACFRGYPRAVRTDNGPEFTSRAV 253