Pairwise Alignments

Query, 1145 a.a., pyruvate carboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 673 a.a., 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) from Shewanella amazonensis SB2B

 Score =  387 bits (994), Expect = e-111
 Identities = 205/451 (45%), Positives = 295/451 (65%), Gaps = 13/451 (2%)

Query: 4   FQKILIANRGEIAIRVMRAANELGKKTVAVYAEEDKLCLHRFKADEAYKIGEGLGPVAAY 63
           F K+LIANRGEIA RV+R A ++G KTVAVY++ D+   H   ADE++ +GE   P ++Y
Sbjct: 2   FNKLLIANRGEIACRVIRTARDMGIKTVAVYSDADRDARHVALADESFYLGES-APASSY 60

Query: 64  LSIDEIIRVAKLSGADAIHPGYGLLSENPDFVDACVANGIAFIGPRAETMRALGDKASAR 123
           L  + II +AK  GA+AIHPGYG LSEN  F  AC A+GIAF+GP ++ + A+G K++A+
Sbjct: 61  LRGELIIDIAKKCGAEAIHPGYGFLSENAAFARACEASGIAFVGPGSDAIDAMGSKSAAK 120

Query: 124 RVAIEAGVPVIPATEVLGDDMDKVR--AEAEAIGFPLMLKASWGGGGRGMRPIFDPDEVA 181
            +  +AGVP++P     GDD       AEA+ IG+PL++KA++GGGG+GMR +    E+ 
Sbjct: 121 LIMEKAGVPLVPGYH--GDDQSDATLLAEAKKIGYPLLIKAAYGGGGKGMRIVESESELK 178

Query: 182 DKVREGRREAEAAFGNGEGYLEKMITRARHVEVQILGDSMGNIYHLWERDCSVQRRNQKV 241
             +   RREA ++FGN +  +E+ + + RHVEVQ+  DS GN  +L +RDCS+QRR+QKV
Sbjct: 179 AAIDSARREAASSFGNDKLLMERYLRQPRHVEVQVFADSQGNCVYLSDRDCSIQRRHQKV 238

Query: 242 VERAPAPYLSSSQREQLCELGRKICAHVNYECAGTVEFLMDMDTGEFFFIEVNPRVQVEH 301
           VE APAP L  S R+Q+ E        ++Y  AGTVEFL+D+D   FFF+E+N R+QVEH
Sbjct: 239 VEEAPAPGLPDSLRKQMGEAAVAAAKAIDYRGAGTVEFLLDVDM-SFFFMEMNTRLQVEH 297

Query: 302 TVTEEVTGIDIVRAQILIAEGKSLVEATGMASQYDVQLNGHAIQCRITTEDPQNNFIPDY 361
            VTE VTG D+V+ Q+L+A G  L        Q+++Q++GHA + RI  EDP N F+P  
Sbjct: 298 PVTEMVTGQDLVKWQLLVAAGAQL-----PLEQHEIQIHGHAFEVRIYAEDPNNEFLPAS 352

Query: 362 GRITAYR-GATGMGIRLDGGTAYSGAVITRYYDSLLEKVTAWAPTPEAAIARMDRALREF 420
           G++T  R       +R+D G      VI+ YYD ++ K+  W  +   A+AR+ RAL ++
Sbjct: 353 GKLTFLREPEPSRHVRIDSGVR-ENDVISNYYDPMIAKLIVWDESRPRALARLTRALGDY 411

Query: 421 RIRGVSTNIAFVENLLKHPTFLNNQYTTKFI 451
           R+ G+  NI F+ N+ +HP F    ++T FI
Sbjct: 412 RVGGLKHNIEFLSNIAEHPAFAQANFSTDFI 442



 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 28/65 (43%), Positives = 32/65 (49%)

Query: 1081 APMPGVVASVAVQAGASVKEGDLLLTIEAMKMETGIHAERDAVVKAVHVTPAAQIDAKDL 1140
            APM G V +  V AG  V  G  LL +EAMKME  I A  D VV      P   +    L
Sbjct: 596  APMNGTVVTHLVAAGDKVSAGQGLLVMEAMKMEYTIEAPFDGVVSEFFFAPGELVSDGTL 655

Query: 1141 LVELE 1145
            L+ LE
Sbjct: 656  LLALE 660