Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  281 bits (719), Expect = 4e-80
 Identities = 182/466 (39%), Positives = 250/466 (53%), Gaps = 11/466 (2%)

Query: 22  VTGLALDSRQVKEGYLFAGLPGSRVHGAEFIQYALRMGAGAILTDAEGARIARDVLDGAE 81
           +T L LDSR +K G  F  + G  V G +FI  A+  GA  +L +A+   +   V   A 
Sbjct: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAG 103

Query: 82  VTLIVAEDPRQAFSAAAALWYGAQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAANIGT 141
           V +I   +  Q  S  A   YG     ++GVTGTNGKT++     Q  + LGH AA +GT
Sbjct: 104 VPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGT 163

Query: 142 TGIEGDFSA--DLAHTTPDPLTLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVRLVAA 199
           TG  G  +A    A+TT + L + A L ++A +G  + A+E SSHGL Q R+  +  VA 
Sbjct: 164 TG-NGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAG 222

Query: 200 GFTNFSQDHLDYHETFEAYFAAKAGLFSRVLADQGMAVINLDDPKGADMMA-IAHGAGAE 258
            F+N S+DHLDYH T EAY AAK  LFS        A+IN+DD  GA  +  +    G  
Sbjct: 223 VFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN--AIINVDDAVGAQWVKQLPQAIGVS 280

Query: 259 LLTVGTHKDAMLRLTAQRFDADGQEMRFTWKGVAHQARLNLVGGFQASNVLVAMGLVMAT 318
           L+T      A+       +   G  + F       +    L+G F A N+L+A+  +++ 
Sbjct: 281 LVTKPNTAQAIWAREVA-YAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSL 339

Query: 319 GAQVGDLVPLLPRLATVRGRMQKVARRENGATVFVDYAHTPDALKTALRALRPHVLGRLV 378
           G +   L+   P+L  V GRM+ + +RE  A + VDYAHTPDAL+ ALRALR H  G+L 
Sbjct: 340 GFEKSALLATAPKLRPVLGRME-LFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLW 398

Query: 379 VVFGAGGDRDSGKRPLMGAAAAAAADVVFVTDDNPRSEDPALIRAQVRAGC--PEATDVP 436
            + G GGDRD GKRP+M A A   AD V +TDDNPRSE P  I A + AG   PE   + 
Sbjct: 399 AIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAHIE 458

Query: 437 -DRAEAILRGVDALEPGDVLLIAGKGHETGQTVGDVVYPFDDAEQA 481
             R +A    +      D++L+AGKGHE  Q + +    + D E A
Sbjct: 459 HHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETA 504