Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 497 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Synechococcus elongatus PCC 7942

 Score =  300 bits (769), Expect = 6e-86
 Identities = 191/471 (40%), Positives = 255/471 (54%), Gaps = 10/471 (2%)

Query: 22  VTGLALDSRQVKEGYLFAGLPGSRVHGAEFIQYALRMGAGAILTDAEGARIARDVLDGAE 81
           +TGL  DSR+ + G LF G+PG++V G +F   A+  GA A++     A   R +    E
Sbjct: 26  ITGLQTDSRRCQPGDLFLGMPGTQVDGGQFWPEAIAAGAVAVIVTPT-ALAQRPLSANPE 84

Query: 82  VTLIVAEDPRQAFSAAAALWYG--AQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAANI 139
             LI+++       A AA +Y   AQ   ++GVTGTNGKT+                A +
Sbjct: 85  ACLILSDQMPVTAGAIAAAFYNQPAQTLKLIGVTGTNGKTTTTHLVEHFLNAADTKTALL 144

Query: 140 GTTGIEGDFSADLA-HTTPDPLTLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVRLVA 198
           GT        +++A HTTP    L A LA     G   A ME SSH LDQ R++G     
Sbjct: 145 GTLYNRWPGYSEVAQHTTPFATDLQAQLATAVDAGCQAAVMEVSSHALDQGRVNGCGFDV 204

Query: 199 AGFTNFSQDHLDYHETFEAYFAAKAGLFSRVLADQGMAVINLDDPKGADMMAIAHGAGAE 258
           A FTN +QDHLDYH T EAYFAAKA LF+     +G AVIN DD  G  ++ +      +
Sbjct: 205 AVFTNLTQDHLDYHGTMEAYFAAKARLFAPPYL-RGKAVINADDAYGQRLITMT--PPGQ 261

Query: 259 LLTVGTHKDAMLRLTAQRFDADGQEMRFTWKGVAHQARLNLVGGFQASNVLVAMGLVMAT 318
            LT      A    T  ++   G E        A   R  LVG F  +N+L A+      
Sbjct: 262 CLTYSVVGTADFCTTDLQYGPTGVEGTIKTPDGAFPFRSPLVGQFNLANLLGAIAAGWTL 321

Query: 319 GAQVGDLVPLLPRLATVRGRMQKVARRENGATVFVDYAHTPDALKTALRALRPHVLGRLV 378
           G  +  ++ ++P    V GRM++V  +++  TV VDYAHTPD+L+  L+A RP + G L+
Sbjct: 322 GLPIETMLAVVPDFVGVPGRMERVVGQDSDPTVIVDYAHTPDSLENLLKAARPFIQGELI 381

Query: 379 VVFGAGGDRDSGKRPLMGAAAAAAADVVFVTDDNPRSEDPALIRAQVRAGCPEATDV--- 435
            VFG GGDRD  KRPLMG  AA  AD V +T DNPR+EDP  I A + AG P A+ V   
Sbjct: 382 CVFGCGGDRDRTKRPLMGEIAARLADRVIITSDNPRTEDPRQILADIVAGIPAASPVVVE 441

Query: 436 PDRAEAILRGVDALEPGDVLLIAGKGHETGQTVGDVVYPFDDAEQASVAVA 486
            DRA AI + + + +PGD +L+AGKGHE  Q +G     FDD EQA +A+A
Sbjct: 442 ADRAAAIRQAILSAQPGDGVLLAGKGHEDYQILGTTKIHFDDREQARLALA 492