Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 486 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Sinorhizobium meliloti 1021

 Score =  403 bits (1035), Expect = e-117
 Identities = 228/468 (48%), Positives = 285/468 (60%), Gaps = 9/468 (1%)

Query: 22  VTGLALDSRQVKEGYLFAGLPGSRVHGAEFIQYALRMGAGAILTDAEGARIARDVLDGAE 81
           + G+  DSRQVK G LF  + GS+  GA +I  AL  GA A++        A     GA 
Sbjct: 27  IGGITADSRQVKPGDLFVAVAGSKADGAAYIADALSRGASAVVAGTGTPAEA-----GAP 81

Query: 82  VTLIVAEDPRQAFSAAAALWYGAQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAANIGT 141
           V  I   DPR+  + AA+ +YG QP TMV VTGT GKTSVASFTRQ+W   G +AA IGT
Sbjct: 82  VFAI--SDPRRFLAKAASSFYGRQPETMVAVTGTAGKTSVASFTRQIWAHSGFSAAMIGT 139

Query: 142 TGIEGDFSADLAH-TTPDPLTLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVRLVAAG 200
           TG+      +    TTPDP++LH  LAE+A +G+THAAMEASSHGLDQRRLDGV L AA 
Sbjct: 140 TGVVAPGRTEYGSLTTPDPVSLHKLLAELADEGVTHAAMEASSHGLDQRRLDGVELAAAA 199

Query: 201 FTNFSQDHLDYHETFEAYFAAKAGLFSRVLADQGMAVINLDDPKGADMMAIAHGAGAELL 260
           FTN  +DH+DYH T E Y A+K  LF  +L     AVI  DD   A+ +A A  AG ++ 
Sbjct: 200 FTNLGRDHMDYHPTVEHYMASKMRLFGALLPKGSPAVIFADDQWSAEAIAAARKAGHDVR 259

Query: 261 TVGTHKDAMLRLTAQRFDADGQEMRFTWKGVAHQARLNLVGGFQASNVLVAMGLVMATGA 320
           TVG + D +     + F    Q          ++  + L G FQ +N LVA GL M+TG 
Sbjct: 260 TVGRNGDFIALKRVEHF-RHKQSAEVHVGDDIYEIHVPLAGDFQIANALVAAGLAMSTGI 318

Query: 321 QVGDLVPLLPRLATVRGRMQKVARRENGATVFVDYAHTPDALKTALRALRPHVLGRLVVV 380
                   L RL    GR++ V + ++GA  +VDYAH PDAL   L ++RP   GR+VVV
Sbjct: 319 TAKAAFSALERLQGASGRLELVGQTKDGALAYVDYAHKPDALANVLESVRPFTTGRVVVV 378

Query: 381 FGAGGDRDSGKRPLMGAAAAAAADVVFVTDDNPRSEDPALIRAQVRAGCPEATDVPDRAE 440
           FG GGDRD GKRP+MG  A+  ADVV VTDDNPRSE P +IRA++ A    AT++ DRAE
Sbjct: 379 FGCGGDRDKGKRPIMGEIASRLADVVIVTDDNPRSEVPEVIRAEIMAAAKGATEIGDRAE 438

Query: 441 AILRGVDALEPGDVLLIAGKGHETGQTVGDVVYPFDDAEQASVAVAAL 488
           AI   V  L+ GD L++AGKGHE GQTVG V  PF D  +   A+  L
Sbjct: 439 AIRAAVGMLKTGDTLIVAGKGHEEGQTVGSVTLPFSDHAEVRKALGGL 486