Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  466 bits (1198), Expect = e-135
 Identities = 258/468 (55%), Positives = 303/468 (64%), Gaps = 7/468 (1%)

Query: 19  GRPVTGLALDSRQVKEGYLFAGLPGSRVHGAEFIQYALRMGAGAILTDAEGARIARDVLD 78
           G  + GL  DSR V  G+LFA LPG +  G  FI  AL  GA A+L   EG  +  D   
Sbjct: 27  GLAIAGLTADSRAVAPGWLFAALPGVKADGRAFIPAALAAGASAVLAP-EGTALPPD--- 82

Query: 79  GAEVTLIVAEDPRQAFSAAAALWYGAQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAAN 138
            A   L+ A +PRQAF+  AA + GAQPAT+V VTGTNGKTS  SFTRQ+W  LG  AA+
Sbjct: 83  -APAALVTAANPRQAFARMAAAFAGAQPATVVAVTGTNGKTSSVSFTRQIWDRLGRTAAS 141

Query: 139 IGTTGIE-GDFSADLAHTTPDPLTLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVRLV 197
           +GT G E G +    + TTPDP++LH  LAEM   G+   AMEASSHGLDQ RLDGVRL 
Sbjct: 142 LGTLGAESGVYRRAGSMTTPDPVSLHKMLAEMTEAGVDALAMEASSHGLDQYRLDGVRLS 201

Query: 198 AAGFTNFSQDHLDYHETFEAYFAAKAGLFSRVLADQGMAVINLDDPKGADMMAIAHGAGA 257
           AA FTN ++DHLDYH T +AY AAKA LF  VL  +G+AV+N DDP    + A+    G 
Sbjct: 202 AAAFTNLTRDHLDYHHTMDAYLAAKARLFGEVLGREGVAVLNADDPAFPTLAALCRDRGQ 261

Query: 258 ELLTVGTHKDAMLRLTAQRFDADGQEMRFTWKGVAHQARLNLVGGFQASNVLVAMGLVMA 317
            +L  G      LRL      A GQ +     G  H   L LVG FQA NVL A+GL +A
Sbjct: 262 SVLDYGRSAKT-LRLAGVSAKAHGQSLDLELFGRHHSVLLPLVGDFQAMNVLCALGLAIA 320

Query: 318 TGAQVGDLVPLLPRLATVRGRMQKVARRENGATVFVDYAHTPDALKTALRALRPHVLGRL 377
           TGA V   V  L  L  V GR++ VARR +GA V+VDYAHTPD L TALRALRPH  G+L
Sbjct: 321 TGAPVDAAVATLASLEGVPGRLEMVARRASGAPVYVDYAHTPDGLVTALRALRPHCRGKL 380

Query: 378 VVVFGAGGDRDSGKRPLMGAAAAAAADVVFVTDDNPRSEDPALIRAQVRAGCPEATDVPD 437
           V VFG GGDRD  KRPLMG A A  ADV  +TDDNPRSEDPA IRA+ R GCP+A ++  
Sbjct: 381 VCVFGCGGDRDRAKRPLMGRAVAEGADVAILTDDNPRSEDPAAIRAEARVGCPDAIEIDG 440

Query: 438 RAEAILRGVDALEPGDVLLIAGKGHETGQTVGDVVYPFDDAEQASVAV 485
           R  AI  GV  L P D+L+IAGKGHETGQT+G VV+PF DA+ A  AV
Sbjct: 441 RDAAIRAGVALLGPNDLLVIAGKGHETGQTIGTVVHPFVDADHARAAV 488