Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 494 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  289 bits (739), Expect = 2e-82
 Identities = 189/474 (39%), Positives = 248/474 (52%), Gaps = 33/474 (6%)

Query: 28  DSRQVKEGYLFAGLPG------SRVHGAEFIQYALRMGAGAILTDAEGARIARDVLDGAE 81
           DSR+V  G +F  +PG      + V GA+FI  A   GAGA++     AR+   + D  E
Sbjct: 23  DSRKVGRGDVFVAVPGVAANGGAGVDGADFIVKAWAAGAGAVV--CLPARVEAALADAPE 80

Query: 82  VTLIVA-EDPRQAFSAAAALWYG--AQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAAN 138
             ++ A +DPR A        YG  A P  +V VTGTNGKT++      ++  LG  A  
Sbjct: 81  GAVVAAHDDPRVAIGLLGQARYGTDALPFPVVAVTGTNGKTTITYLLDHVFSALGRRAGV 140

Query: 139 IGTTGIEGD-FSADLAHTTPDPLTLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVRLV 197
           +GT       F+ D   TTPD +  HA L  M   G+  A ME SSH LDQRR+ G+R  
Sbjct: 141 LGTVSYRWPGFAMDAPLTTPDCIETHAMLGRMRDAGVDVALMEVSSHALDQRRVAGIRFA 200

Query: 198 AAGFTNFSQDHLDYHETFEAYFAAKAGLFSRVLADQGMAVINLDDPKGADMMA-IAHGAG 256
            A  TN +QDHLDYH   E Y+AAKA LF+ +        +N DD  G  ++  + H  G
Sbjct: 201 GAILTNLTQDHLDYHGDMEHYYAAKARLFTELPDADKACAVNADDAWGRRLLGEVPHAIG 260

Query: 257 AELLTVGTHKDAMLRLTAQRF--------DADGQEMRFTWKGVAHQARLNLVGGFQASNV 308
             L       DA   ++ +RF           G  +R T++G   +   +LVG   ASN+
Sbjct: 261 FGL-------DAGNAVSGRRFLHGEMVRNATSGLTLRMTYEGRQWELSSHLVGAHNASNL 313

Query: 309 LVAMGLVMATGAQVGDLVPLLPRLATVRGRMQKVARRENGATVFVDYAHTPDALKTALRA 368
           L    + +  G    D   L      V GR++++     G  +FVDYAHTPDAL+  LRA
Sbjct: 314 LAVQAVCLGMGLAPQDFASLAG-FTGVPGRLERIVN-PRGLDIFVDYAHTPDALENVLRA 371

Query: 369 LRPHVLGRLVVVFGAGGDRDSGKRPLMGAAAAAAADVVFVTDDNPRSEDPALIRAQVRAG 428
           LR     R+V VFG GG+RD  KRPLMG A A  ADV  +T DNPR EDP  I A V  G
Sbjct: 372 LRAVGFSRIVTVFGCGGNRDRTKRPLMGQAVARHADVAVLTSDNPRHEDPEAIMADVLPG 431

Query: 429 CPEATDV---PDRAEAILRGVDALEPGDVLLIAGKGHETGQTVGDVVYPFDDAE 479
              A  V    DRA AI + +  L+PGDVLL+AGKGHE+ Q +GD   P+ D +
Sbjct: 432 LAGARKVVSDADRARAIGKALALLQPGDVLLVAGKGHESYQQIGDRKVPYSDQQ 485