Pairwise Alignments

Query, 470 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 485 a.a., UDP-N-acetylmuramate--alanine ligase from Pseudomonas stutzeri RCH2

 Score =  389 bits (998), Expect = e-112
 Identities = 213/470 (45%), Positives = 296/470 (62%), Gaps = 9/470 (1%)

Query: 2   KDSFVMNAATKLPTQLGPIHFTGIGGIGMSGIAEVLLTHGYTVQGSDLKPSKITERLERL 61
           K    + A  +   ++  IHF GIGG+GM GIAEVLL  GY V GSDLK S  T+RL+  
Sbjct: 3   KSPAAVKAEVRRMRRIRRIHFVGIGGVGMCGIAEVLLNLGYEVSGSDLKESASTDRLQSF 62

Query: 62  GAKIFIGQVGENLADAEVVVISSAIKPGNPELETARARGLPVVRRAEMLAELMRLKSNIA 121
           GA+IFIG    N+A A+V+V+SSA+   NPE+  A  + +PVV RAEMLAELMR +  IA
Sbjct: 63  GAQIFIGHQAGNVAGADVLVVSSAVNSANPEVALALEQRIPVVPRAEMLAELMRYRHGIA 122

Query: 122 IAGTHGKTTTTTMVATLLDRGGIDPTVINGGIIHAYDSNARAGAGEWMVVEADESDGTFN 181
           +AGTHGKTTTT+++A++   GG+DPT + GG + A  +NA+ G+  +++ EADESD +F 
Sbjct: 123 VAGTHGKTTTTSLLASVFAAGGLDPTFVIGGRLTAAGTNAQLGSSRYLIAEADESDASFL 182

Query: 182 RLPATIAVVTNIDPEHME-HWGSFERLKDGFHEFVSNIPFYGLAVCCTDHPEVQALVGRI 240
            L   +AVVTNID +HM  + G F +LK  F EF+ N+PFYGLAV C D P V+ ++ +I
Sbjct: 183 HLQPMVAVVTNIDADHMSTYGGDFGKLKKTFVEFLHNLPFYGLAVLCVDDPVVREIIPQI 242

Query: 241 TDRRVVTFGFNTQADVRAVNLTYKSGVAHFDILLRNEGQVISGCTLPMPGDHNVSNALAA 300
             R   T+GF+  ADVRA+N+  +    +F +L   +G      ++ MPG+HNV NALA 
Sbjct: 243 -GRPTTTYGFSEDADVRAINVRQEGMRTYFTVL--RDGCEPLDVSVHMPGNHNVLNALAT 299

Query: 301 VAVARHLGMKRDEIRAALAGFAGVNRRFTKVAEL----GGVTIIDDYGHHPVEIAAVLKA 356
           +A+A   G+  + I   LA FAGV RRF    +L    G V ++DDYGHHP E+AAV+KA
Sbjct: 300 IAIATDEGIDDEAIIQGLAEFAGVGRRFQVYGDLPVENGSVMLVDDYGHHPREVAAVIKA 359

Query: 357 ARQA-SEGRVIAVHQPHRFSRLASLFEDFCTCFNEADVVGISDIFAAGEDPIPGASRDDL 415
            R    E R++ V+QPHR+SR   L++DF     E++V+ + +++ AGEDPIPGA    L
Sbjct: 360 VRGGWPERRLVMVYQPHRYSRTRDLYDDFVQVLGESNVLLLMEVYPAGEDPIPGADSRQL 419

Query: 416 VKGLIAHGHRHAVAVPDEDALEALIRAEAKPGDIVVCLGAGTISTWAHNL 465
              +   G    + V     L  L++   + GDI++C GAG I   A  L
Sbjct: 420 CHSIRQRGQLDPIYVERGVDLAPLVKPLLRAGDILLCQGAGDIGGLAPQL 469