Pairwise Alignments

Query, 470 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (975), Expect = e-110
 Identities = 197/454 (43%), Positives = 282/454 (62%), Gaps = 9/454 (1%)

Query: 20  IHFTGIGGIGMSGIAEVLLTHGYTVQGSDLKPSKITERLERLGAKIFIGQVGENLADAEV 79
           IHF GIGG GMSGIAEVLL  GY + GSDL  + +T+RL   GA IFIG    N+A A V
Sbjct: 25  IHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLADKGATIFIGHEAHNVAHASV 84

Query: 80  VVISSAIKPGNPELETARARGLPVVRRAEMLAELMRLKSNIAIAGTHGKTTTTTMVATLL 139
           VV+S+AI   NPE++ AR + +P+VRRAEMLAELMR +  IA+AGTHGKTTTT +V  + 
Sbjct: 85  VVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGKTTTTALVTQIY 144

Query: 140 DRGGIDPTVINGGIIHAYDSNARAGAGEWMVVEADESDGTFNRLPATIAVVTNIDPEHME 199
              G+DPT +NGG++ +  +NAR G+   ++ EADESD +F  L   + +VTNI+ +HM+
Sbjct: 145 SEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASFLHLQPMVTIVTNIEADHMD 204

Query: 200 -HWGSFERLKDGFHEFVSNIPFYGLAVCCTDHPEVQALVGRITDRRVVTFGFNTQADVRA 258
            + G FE LK  F +F+ N+PFYG A+ C D P ++ L+ R++ R+V+T+GF+  ADVR 
Sbjct: 205 TYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVS-RQVITYGFSEDADVRI 263

Query: 259 VNLTYKSGVAHFDILLRNEGQVISGCTLPMPGDHNVSNALAAVAVARHLGMKRDEIRAAL 318
            N         F ++   +G+     TL +PG HN  NA AA+AVA    ++ + I  A+
Sbjct: 264 ENYRQNGQQGQFTVV--RKGKANLDITLNIPGRHNALNAAAAIAVATEDDIRDEAILRAM 321

Query: 319 AGFAGVNRRFTKVAEL----GGVTIIDDYGHHPVEIAAVLKAARQA-SEGRVIAVHQPHR 373
           A   G  RRF  + E     G   ++DDYGHHP E+   +KAAR   +E R++ + QPHR
Sbjct: 322 ANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIFQPHR 381

Query: 374 FSRLASLFEDFCTCFNEADVVGISDIFAAGEDPIPGASRDDLVKGLIAHGHRHAVAVPDE 433
           ++R   L++DF     + DV+ + D++AAGE PI GA    L + + + G    + VPD 
Sbjct: 382 YTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRGKIDPIFVPDS 441

Query: 434 DALEALIRAEAKPGDIVVCLGAGTISTWAHNLPA 467
             L +++    + GD+V+  GAG +   A +L A
Sbjct: 442 QTLPSVLANILQDGDLVLTQGAGDVGKVARHLAA 475