Pairwise Alignments

Query, 389 a.a., carbamoyl-phosphate synthase, small subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  375 bits (964), Expect = e-109
 Identities = 202/382 (52%), Positives = 258/382 (67%), Gaps = 11/382 (2%)

Query: 9   TACLVLADGTVFYGRGFGAVGTTSAELCFNTAMTGYQEIMTDPSYAGQVVTFTFPHIGNT 68
           +A LVL DGTVF G   GA G +  E+ FNT+MTGYQEI+TDPSY+ Q+VT T+PHIGNT
Sbjct: 4   SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63

Query: 69  GVTAEDDEAADPVAAGMVVKWDPSEPSNWRAQGKLTEWLTRTGRIGIGGVDTRRLTRQIR 128
           G  +ED+E+    A G+V++  P   SN+R++  L+++L     +GI  +DTR+LTR +R
Sbjct: 64  GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123

Query: 129 QQGAPH-VALAHDPEGNFDLEALVAQARAFAGLEGVDLAREVTCAQSYRWDEQRWAW--- 184
           ++GA +   +A D   N D    +A+A+ F GL+G+DLA+ V+  ++Y W +  W     
Sbjct: 124 EKGAQNGCIMAGD---NLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGG 180

Query: 185 -PEGYTRRTTPGHKVVALDYGAKRNILRCLASAGCDVTVMPATSTAEDVLAQNPDGVFLS 243
            PE       P H VVA D+GAKRNILR L   GC +TV+PA ++AEDVLA NPDGVFLS
Sbjct: 181 LPEAKADSELPYH-VVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLS 239

Query: 244 NGPGDPAATGKYAVPMIKGVLEASDVPVFGICLGHQMLALALGAQTVKMNHGHHGANHPV 303
           NGPGDP     YA+   +  LE  ++PVFGICLGHQ+LALA GA+TVKM  GHHGANHPV
Sbjct: 240 NGPGDPEPC-TYAIEATRVFLE-KNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPV 297

Query: 304 KDLETGKVEITSMNHGFTVDSQTLPHGVVETHRSLFDGSNCGIRMTDRPVFSVQYHPEAS 363
           KDL+ G V ITS NHGF  D  TLP  +  TH+SLFDGS  GI  TD+P FS Q HPEAS
Sbjct: 298 KDLDRGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTDKPAFSFQGHPEAS 357

Query: 364 PGPQDSYYLFERFAAAMAARRA 385
           PGP D+  LF+ F   +   RA
Sbjct: 358 PGPHDAAPLFDHFIELIKQFRA 379