Pairwise Alignments

Query, 389 a.a., carbamoyl-phosphate synthase, small subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 390 a.a., carbamoyl phosphate synthase small subunit (RefSeq) from Shewanella loihica PV-4

 Score =  380 bits (977), Expect = e-110
 Identities = 198/373 (53%), Positives = 252/373 (67%), Gaps = 8/373 (2%)

Query: 7   TPTACLVLADGTVFYGRGFGAVGTTSAELCFNTAMTGYQEIMTDPSYAGQVVTFTFPHIG 66
           T +A LVL DGTVF G   GA G    E+ FNT+MTGYQEI+TDPSY+ Q+VT T+PHIG
Sbjct: 11  TKSALLVLEDGTVFSGTAIGADGLAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70

Query: 67  NTGVTAEDDEAADPVAAGMVVKWDPSEPSNWRAQGKLTEWLTRTGRIGIGGVDTRRLTRQ 126
           NTG  +ED E+    A G++++  P   SN+R +  L+++L     +GI  +DTR+LTR 
Sbjct: 71  NTGTNSEDTESEAVHACGLIIRDLPLLASNFRNEQSLSDYLKSNNVVGIADIDTRKLTRI 130

Query: 127 IRQQGAPHVALAHDPEGNFDLEALVAQARAFAGLEGVDLAREVTCAQSYRWDEQRWAWPE 186
           +R++GA   A+     G+ D    +A A+AF GL+G+DLA+EVT  + Y+W    W    
Sbjct: 131 LREKGAQAGAIL---VGDMDEAKALAAAKAFPGLKGMDLAKEVTTQKQYQWRSGSWRLVG 187

Query: 187 GYTRRTTPG---HKVVALDYGAKRNILRCLASAGCDVTVMPATSTAEDVLAQNPDGVFLS 243
           G    T      +KVVA DYG KRNILR L   GCDVTV+PA + A +VLA NPDG+FLS
Sbjct: 188 GLPSDTPESELKYKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPAAEVLAMNPDGIFLS 247

Query: 244 NGPGDPAATGKYAVPMIKGVLEASDVPVFGICLGHQMLALALGAQTVKMNHGHHGANHPV 303
           NGPGDP     YA+  I+  L+ +D+P+FGICLGHQ+LALA GA+T+KM  GHHGANHPV
Sbjct: 248 NGPGDPEPCD-YAIEAIQAFLK-TDIPLFGICLGHQLLALASGAKTLKMKFGHHGANHPV 305

Query: 304 KDLETGKVEITSMNHGFTVDSQTLPHGVVETHRSLFDGSNCGIRMTDRPVFSVQYHPEAS 363
            +LE G V ITS NHGF  D  +LP  V  TH+SLFDGS  GI +TD+P FS Q HPEAS
Sbjct: 306 SNLEKGNVMITSQNHGFAADETSLPANVKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEAS 365

Query: 364 PGPQDSYYLFERF 376
           PGP D+  LF+ F
Sbjct: 366 PGPHDAAPLFDHF 378