Pairwise Alignments

Query, 258 a.a., protein of unknown function DUF140 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 258 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (320), Expect = 2e-34
 Identities = 77/256 (30%), Positives = 138/256 (53%), Gaps = 1/256 (0%)

Query: 2   IRLIAAIGASVLGILGAAGRFAIFVGAAFSHMVRPPFYWREFGQALLNIGYFSLPVVGLT 61
           +R ++++G   L +    GR ++ +  A     +P  ++    + L +IG  SL ++ ++
Sbjct: 1   MRWVSSVGQRTLAVSETFGRASLMLFGALVGRPQPIRHFPLLVRQLYSIGVQSLAIIIVS 60

Query: 62  AFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTSSIAAEIAT 121
             F G  L+LQ Y     + AE  + Q+VA+ ++RELGPV+  L+ A R  S++ AEI  
Sbjct: 61  GLFIGMVLSLQGYVILVDYGAETSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGL 120

Query: 122 MKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVSTSRLGFNP 181
           MK TEQ+ +L  ++  P+K + APR  A ++ +PLL  +   +GI GG LV     G + 
Sbjct: 121 MKATEQLSSLEMMAVDPLKRVIAPRFWAGVISMPLLAMIFMAVGIWGGQLVGVDWKGIDH 180

Query: 182 ATYLQNTVDFLEL-HDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAATKSSVVAA 240
            ++       +EL  DI +S  K  VF      +  ++G ++   ++G+  AT  +VV +
Sbjct: 181 GSFWSAMQASVELGQDIGNSTIKCVVFAFTVTWIALFNGYDAIPTSEGISRATTRTVVHS 240

Query: 241 AVLILAANYMLTELFF 256
           ++ +L  +++LT L F
Sbjct: 241 SLAVLGLDFVLTALMF 256