Pairwise Alignments

Query, 258 a.a., protein of unknown function DUF140 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 259 a.a., phospholipid/cholesterol/gamma-HCH transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  143 bits (361), Expect = 3e-39
 Identities = 87/260 (33%), Positives = 143/260 (55%), Gaps = 11/260 (4%)

Query: 4   LIAAIGASVLGILGAAG---RFAIFVGAAFSHMVRPPFYWREFGQALLNIGYFSLPVVGL 60
           LI+++G SVL  LG AG   RF + +   F  ++R P   R   + +  +G +SL ++ +
Sbjct: 5   LISSVGRSVLDGLGTAGYATRFFLRLVLEFFPLLRRP---RLVTKQIHFVGNYSLVIIAV 61

Query: 61  TAFFTGGALALQIYAGGARFSAEAVVPQIVAIGMVRELGPVLGGLMIAARVTSSIAAEIA 120
           +  F G  L LQ Y    R+ +E  +  +VA+ +VRELGPV+  L+ A R  +S+ AEI 
Sbjct: 62  SGLFVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIG 121

Query: 121 TMKVTEQIDALVTLSTHPMKYLTAPRVLAAILVVPLLVAVGDTIGIMGGYLVSTSRLGFN 180
            MK  EQ+ A+  ++  P+K + APR+ A I+ +P+L A+   +GI GGY+V    +G +
Sbjct: 122 LMKAGEQLTAMEMMAVDPVKVVVAPRLWAGIIAMPILAAIFSAVGIAGGYVVGVLLIGVD 181

Query: 181 PATY---LQNTVDFLELHDIVSSLAKGAVFGAIAALMGCYSGMNSGRGAQGVGAATKSSV 237
              +   +Q  VD     D+ + + K  VFG     +  + G  +    +GV  AT  +V
Sbjct: 182 AGAFWSQMQGGVDV--WRDVGAGVVKSVVFGLAVTFVALFQGYEAKPTPEGVSRATTKTV 239

Query: 238 VAAAVLILAANYMLTELFFS 257
           V A++ +L  +++LT L FS
Sbjct: 240 VYASLAVLGLDFLLTALMFS 259