Pairwise Alignments

Query, 725 a.a., excinuclease ABC, B subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 700 a.a., excinuclease ABC subunit B from Cupriavidus basilensis FW507-4G11

 Score =  750 bits (1937), Expect = 0.0
 Identities = 388/681 (56%), Positives = 491/681 (72%), Gaps = 5/681 (0%)

Query: 22  GRMFRMATSFEPAGDQPTAIAELSEGVRNGERDQVLLGATGTGKTFTMAKVIEQTQRPAI 81
           G  F++   + PAGDQP AI +L EGV +G   Q LLG TG+GKTFTMA VI +  RPAI
Sbjct: 21  GSPFQLYQPYLPAGDQPEAIRQLVEGVEDGLSYQTLLGVTGSGKTFTMANVIARMGRPAI 80

Query: 82  ILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESQINEQIDR 141
           + APNKTLAAQLY EF+ FFP NAVEYFVSYYDYYQPEAYVP+ D +IEK+S INE I++
Sbjct: 81  VFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQ 140

Query: 142 MRHSATRALLERDDVIIVASVSCIYGIGSVETYEAMTQDLVAGQSYDQRQIMADLVAQQY 201
           MR SAT++LLER D IIVASVS IYGIG+   Y  M   L  G    QR ++A L+A QY
Sbjct: 141 MRLSATKSLLERRDTIIVASVSAIYGIGNPSEYHKMILTLRTGDKISQRDVIARLIAMQY 200

Query: 202 RRNDAGFQRGSFRVRGDSLEIWPAHMEDRALKFSFFGEELESITEFDPLTGEKADTLDRI 261
            RN+  FQRG+FRVRGD+L+I+PA   + A++   F +E++S+  FDPLTG     + R 
Sbjct: 201 TRNETDFQRGTFRVRGDTLDIFPAEHAELAVRVDMFDDEIDSLQFFDPLTGRVRQKIPRF 260

Query: 262 RIYANSHYVTPRPTLQQAIVSIKKELRIRLDQLVAEGKLLEAQRLEQRTNFDIEMLEATG 321
            +Y +SHYVTPR T+ +AI  IK ELR RLD    E KL+EAQRLEQR+ FD+EML   G
Sbjct: 261 TVYPSSHYVTPRETVLRAIEDIKVELRERLDFFYKENKLVEAQRLEQRSRFDLEMLSELG 320

Query: 322 VCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQIGGMYKGDFRRKMTL 381
            C GIENYSR+L+G  PG+PPPTL +Y+P +A++F DESHV + Q  GMY GD  RK TL
Sbjct: 321 FCKGIENYSRHLSGAKPGDPPPTLVDYLPQDALMFLDESHVLMGQFNGMYNGDKARKTTL 380

Query: 382 AEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWELEQAGGVFTEQVIRPTGLLDP 441
            ++GFRLPS +DNRPLKF E++    Q +FVSATP+ +E E AG V  EQV+RPTGL+DP
Sbjct: 381 VDYGFRLPSALDNRPLKFSEFEGKMRQVMFVSATPSNYENEHAGQV-VEQVVRPTGLVDP 439

Query: 442 QVEIRPVEMQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQGIKVRYMHSDID 501
            + +RP   QVDDLL E+ +  + G R LVTTLTKRM+E LTE++ E G+KVRY+HSDID
Sbjct: 440 IIHVRPATTQVDDLLSEIHQKVSVGERVLVTTLTKRMSEQLTEFLTENGVKVRYLHSDID 499

Query: 502 TLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGR 561
           T+ER+EI+RDLRLG FDVL+GINLLREGLDIPE  LVAILDADKEGFLR+E SL+QTIGR
Sbjct: 500 TVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR 559

Query: 562 AARNAEGRVIMYADRITGSMERALAETNRRRAKQIAYNEEHGITPETVKKNVEDVMAGLY 621
           AARN  G  I+YADR+T SM+RA+ ET RRRAKQIA+NE +GI P  V K ++D++ G+Y
Sbjct: 560 AARNVNGTAILYADRMTDSMKRAIGETERRRAKQIAFNEANGIVPRGVVKRIKDIIDGVY 619

Query: 622 Q-GDVDMNRVTAKVEKPLHGGNLETV---LEGLRADMRKAAENLEFEEAARLRDEVKRLE 677
             G+V    + A+        + + V   ++ L   M + A+NLEFE+A ++RD++ +L+
Sbjct: 620 DPGEVKAELLAAEERAKYEDMSEKQVAKEIKRLEKQMFEHAKNLEFEKAGQVRDQLAKLK 679

Query: 678 AVDLAIADDPLARQSAIEAAS 698
                 + D      A  AAS
Sbjct: 680 RQIFGASGDGEHLPPAAAAAS 700