Pairwise Alignments

Query, 725 a.a., excinuclease ABC, B subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

 Score =  984 bits (2545), Expect = 0.0
 Identities = 491/704 (69%), Positives = 595/704 (84%), Gaps = 11/704 (1%)

Query: 15  TRP-KLEGGRMFRMATSFEPAGDQPTAIAELSEGVRNGERDQVLLGATGTGKTFTMAKVI 73
           +RP K EGG+ F++ + ++PAGDQPTAIAEL EG++NG++DQVLLG TG+GKTFTMA+VI
Sbjct: 36  SRPDKSEGGKKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVI 95

Query: 74  EQTQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKES 133
            +TQRPA+ILAPNKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAYVPR+DTYIEK+S
Sbjct: 96  ARTQRPALILAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDS 155

Query: 134 QINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYEAMTQDLVAGQSYDQRQIM 193
            INEQIDRMRHSATRA+LERDDVI+VASVSCIYGIGSVETY AMT  L  GQ  D++Q++
Sbjct: 156 SINEQIDRMRHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLI 215

Query: 194 ADLVAQQYRRNDAGFQRGSFRVRGDSLEIWPAHMEDRALKFSFFGEELESITEFDPLTGE 253
           ADLVAQQY+RND  F+RG+FR RGD++EI+PAH EDRA + + FG+E+E+++EFD LTG+
Sbjct: 216 ADLVAQQYKRNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGK 275

Query: 254 KADTLDRIRIYANSHYVTPRPTLQQAIVSIKKELRIRLDQLVAEGKLLEAQRLEQRTNFD 313
           K   L+ I++YANSH+VTPRPTL+QAI++I++EL+ RL+ L A GKLLEAQRLEQRT FD
Sbjct: 276 KTADLEMIKVYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFD 335

Query: 314 IEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQIGGMYKG 373
           +EM+E TG C GIENYSRYL+GR  GEPPPT FEYIPDNA++F DESH +VPQIG MYKG
Sbjct: 336 LEMIETTGSCAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKG 395

Query: 374 DFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWELEQAGGVFTEQVI 433
           D  RK TLAE+GFRLPS +DNRPLKFEEWDAMRPQSV VSATPA WELE+AGGVF EQVI
Sbjct: 396 DRNRKWTLAEYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVI 455

Query: 434 RPTGLLDPQVEIRPVE----MQVDDLLDEVRRVTADGFRTLVTTLTKRMAEDLTEYMHEQ 489
           RPTGL+DP VE+RPV      QVDD++DE+R+    G+RTLVT LTK+MAEDLTEY+ EQ
Sbjct: 456 RPTGLIDPPVEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQ 515

Query: 490 GIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFL 549
           GI+VRYMHSD+DT+ERIEI+RDLRLG FDVL+GINLLREGLDIPECGLVAILDADKEGFL
Sbjct: 516 GIRVRYMHSDVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFL 575

Query: 550 RSETSLVQTIGRAARNAEGRVIMYADRITGSMERALAETNRRRAKQIAYNEEHGITPETV 609
           RSETSL+QTIGRAARN +G+VI+YADR+TGSMERA+AET RRR KQ AYN EHGITPE+V
Sbjct: 576 RSETSLIQTIGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESV 635

Query: 610 KKNVEDVMAGLYQ-GD---VDMNRVTAKVEKPLHGGNLETVLEGLRADMRKAAENLEFEE 665
           K++++D++   Y+ GD   V M  ++   ++P  G N +  L+ L A MR+AA NLEFE 
Sbjct: 636 KRDIKDILNSPYERGDRVLVPMG-MSETDDRPFSGDNFKAALKDLEAKMREAAANLEFET 694

Query: 666 AARLRDEVKRLEAVDLAIADDPL-ARQSAIEAASDAAVKAQGRS 708
           AARLRDE+KR++ +DL  A++ L A   A++ A    V+A+ R+
Sbjct: 695 AARLRDEIKRMKLMDLEFANEVLTAPGEAVDKAMPKRVRAELRA 738