Pairwise Alignments

Query, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 280 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  211 bits (537), Expect = 1e-59
 Identities = 109/262 (41%), Positives = 156/262 (59%)

Query: 8   KGYNQRRACALAGIDPRVYRRRSKRLADTELRVRMKELASERRRFGYRRLHMLLKREGWE 67
           +G ++RRA A+ G+     R   +   + ELR R+  LA   RR+G   +++ L++EG  
Sbjct: 16  RGASERRALAVIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLKLRQEGRI 75

Query: 68  VNWKKLYRLYRDEGLTVRKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRV 127
           VN+K++ RLYR++ L VR+R  +K  +G R P+  P   NQ WS+DF+ D   +GR  + 
Sbjct: 76  VNYKRVERLYREQQLQVRRRKRKKVPIGERQPLLRPSQANQVWSMDFVFDRTAEGRVIKC 135

Query: 128 LNVIDDFSRECLAAVVDTSISGARVARELDRIAELRGYPCLVVSDNGTELTSNAMLKWQE 187
           L ++DD + E +A  V+ +ISG  V R LDR+A  RG P ++ +DNG E    AM+ W  
Sbjct: 136 LVIVDDATHEVVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEFCGKAMVAWAH 195

Query: 188 DRKVDWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHACRMIAAWRDDYNHHRPH 247
            R V    I PGKP QN  VESFNGR+R+ECLNEH FP+L HA   I  WR +Y+  RP 
Sbjct: 196 ARNVQLLLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYHEDRPK 255

Query: 248 SSLDGLTPREYHQRSREDQTLN 269
            ++ G+TP  Y Q       +N
Sbjct: 256 KAIGGMTPAAYAQHLANTDIIN 277