Pairwise Alignments

Query, 880 a.a., NAD-dependent epimerase/dehydratase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 340 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 86/323 (26%), Positives = 134/323 (41%), Gaps = 40/323 (12%)

Query: 531 ITGCTGFIGTNLIPKLLAKGYTIRALVLPGTG--------DVLPDSPQ---IELIEGGLG 579
           ITG  GFIG+NL+ +LL    T+  L    TG          L  S Q      I G + 
Sbjct: 20  ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDIR 79

Query: 580 DTDALARLVEGARVVLHMAARLAGSCTLVELRETN---VEGTHNLIRAVNAAGACARFVF 636
           D      +V G   VLH AA  +   ++ +   TN   + G  N+++A   A   + F +
Sbjct: 80  DYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKS-FTY 138

Query: 637 CSSVAAYQNQFAEAEWPIHESSALRVDGGHDLSDYGMTKIAGENLARFYGRKFGYEHAIL 696
            +S + Y +  A  +        +  + G+ LS Y +TK   E  A  Y R +G+E   L
Sbjct: 139 AASSSTYGDHPALPK--------VEQNIGNPLSPYAVTKYVNELYASVYARTYGFETIGL 190

Query: 697 RFALVYGVGDPLVDPMVKTEAPKPEFG----KGQ------QGEQPRQFVHVTDAVEA-IL 745
           R+  V+G      DP     A  P++     KG+       GE  R F ++ + V+  IL
Sbjct: 191 RYFNVFGRRQ---DPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNIL 247

Query: 746 RACFEPGARNETFTVAGPDVITYRDMGRMTRIAIGKASKDDLDPDRTRVWRR---YVQQY 802
            A     A+NE + VA  D  T  D+    + ++     +       R +R       Q 
Sbjct: 248 AATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQA 307

Query: 803 DISKGKNKLKFYPSVPFAEGLRE 825
           D+SK   +L +  +    EG+ E
Sbjct: 308 DVSKAVTRLGYQYTHKILEGISE 330