Pairwise Alignments

Query, 422 a.a., hypothetical protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 372 a.a., PQQ-dependent oxidoreductase, gdhB family from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (285), Expect = 5e-30
 Identities = 128/423 (30%), Positives = 179/423 (42%), Gaps = 82/423 (19%)

Query: 16  ATALAAPAFAANTTSLSHEIVLEGLENPWDVAFLEDGTMFFTEKCLGLSVRLPDGSVNKL 75
           A   AA A AA   +   E V  GLENPW VAFL       TE+   L V   DGS+   
Sbjct: 15  AMGFAASALAAEVRA---ERVATGLENPWAVAFLPAHRYLVTERPGRLRVVGADGSIGPP 71

Query: 76  LGMKGTDDDYASTAEDLFCEGQAGMQGVAVDPDFAENRQIYVYSTSDLTAPG---SNRLL 132
           +               +   GQ G+  V  D  F  NR +Y +  S+  A G   S  + 
Sbjct: 72  V----------EGLPAIAAGGQGGLLDVVTDSAFDVNRMVY-FCFSEPAAGGAGNSTAVA 120

Query: 133 RMTVGEDLASVADRTDIVEDVPYKPAATDHPFGGPGAHNGGRVRFGPDGFIYLTTGDTHN 192
           R T+  ++  + D   ++         +  P     AH G R+    DG +++T G+ ++
Sbjct: 121 RATLSSNMVRL-DNLQVI--------FSQRPKVSSSAHFGCRIVEAKDGTLFVTLGERYS 171

Query: 193 -GEGPQSPTLLAGKVLRIDRDGNAAEGN--APPEGFDPRIYTYGHRNTQGITFHPETGAA 249
             E  Q      GKV+RI +DG     N      G  P I++YGHRN+QG T  P+ G  
Sbjct: 172 RKEDAQELDNHLGKVVRIQKDGVVPTDNPFVGRPGALPEIWSYGHRNSQGATLGPD-GRL 230

Query: 250 ITAEHGPWHSDEITVLQNGGNAGWDP---RPNVGGRGECPDGYCGYSPNQMEGMDRYERA 306
              +HGP   DEI V   G N GW       N GG G+  DG         +GM+     
Sbjct: 231 WMNDHGPQGGDEINVPLAGRNYGWPVITYGENYGG-GKIGDGL-----TAKDGME----- 279

Query: 307 AFMPMTDLATYPDAMQPIWDNNGW--SQGTSSAEFLTGDQWGD-WENHLVVGIMGIGFGG 363
                          QP+   + W  S   S   FLT D++G  W+ +L VG +  G+  
Sbjct: 280 ---------------QPL---HYWVPSIAPSGMAFLTSDRYGPAWKGNLFVGSLKFGY-- 319

Query: 364 TPIGQRIDVIELNEAGTEVVDVTEMTLPMEPG--RFRSLVQGPDGALYAVVDQ--GMIHK 419
                 +D IEL +       V E  L +E G  R R + QGPDG LY + D+  G + +
Sbjct: 320 ------LDRIELKDGKV----VAEHKL-LEDGHARVRDVRQGPDGLLYVLTDEQDGKLLR 368

Query: 420 MMP 422
           + P
Sbjct: 369 LQP 371