Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 241 a.a., signal peptide protein from Sinorhizobium meliloti 1021

 Score = 49.7 bits (117), Expect = 2e-11
 Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 6/100 (6%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRG-----ANLTGAELVGADFTGS-NLENAILHG 59
           DF+ A +   D   A+L RA    A L G     ANL+ A+L GA   G  +L+ A L  
Sbjct: 135 DFTGARLTGADFEKAELGRANFDKAVLTGTRFSMANLSRAKLSGAVLEGPIDLDRAFLFL 194

Query: 60  ADISGANFTKTTGLTHEMLGAAIGSQDTILPEGFVFPQDW 99
             I G + +  +GLT E +    G   T LP G   P  W
Sbjct: 195 TRIEGVDLSSASGLTQEQVDLTCGDGATKLPSGLAAPGKW 234



 Score = 35.4 bits (80), Expect = 4e-07
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 4   GVDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS 63
           G+D+   N  ++      L  + L G+NL   + T  +L GA+ T +NLE A L  A ++
Sbjct: 43  GIDWQDCNKKQI-----MLGGSDLPGSNLFNTDFTMTDLRGANLTSANLEKATLVRASLA 97

Query: 64  GANFTK 69
           GA   K
Sbjct: 98  GARADK 103



 Score = 35.0 bits (79), Expect = 5e-07
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
           D   AN+   +   A L RA L GA    AN +  E    +F+  + ENA    A++   
Sbjct: 75  DLRGANLTSANLEKATLVRASLAGARADKANFSRVEAYRGNFSAISAENASFASAELQRT 134

Query: 66  NFT--KTTGLTHE 76
           +FT  + TG   E
Sbjct: 135 DFTGARLTGADFE 147



 Score = 25.0 bits (53), Expect = 6e-04
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 35 ANLTGAELVGADFTGSNLENAILHGADISGANFTKTTGLTHEMLGAAIGS 84
          A+   +   G D+   N +  +L G+D+ G+N   T     ++ GA + S
Sbjct: 34 ADCKSSARAGIDWQDCNKKQIMLGGSDLPGSNLFNTDFTMTDLRGANLTS 83