Pairwise Alignments

Query, 103 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 431 a.a., Uncharacterized low-complexity proteins from Phaeobacter inhibens DSM 17395

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query: 5   VDFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISG 64
           +D    N+ R D  +  L+ A L GA+L+GAN  G  L  AD + + L +A L+GA+  G
Sbjct: 265 IDLRRVNLQRFDLSNLDLSGAALSGAHLQGANCIGTNLRNADLSFAQLYDAKLNGAEFEG 324

Query: 65  ANF 67
           A F
Sbjct: 325 AIF 327



 Score = 41.6 bits (96), Expect = 1e-08
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 26/121 (21%)

Query: 6   DFSHANMVRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADIS-- 63
           D S+ ++       A L  A  IG NLR A+L+ A+L  A   G+  E AI   AD+S  
Sbjct: 276 DLSNLDLSGAALSGAHLQGANCIGTNLRNADLSFAQLYDAKLNGAEFEGAIFFRADMSRA 335

Query: 64  --------------GANFT---------KTTGLTHEMLGAAIGSQDTILPEGFVFPQD-W 99
                         G NF            T +T + +  + G+  T+LP+    P   W
Sbjct: 336 DLSFVKFDSSTDIDGTNFVGSLLNCIDLSETAITPKQINESFGTVGTVLPKNIGRPSSIW 395

Query: 100 M 100
           +
Sbjct: 396 L 396



 Score = 29.3 bits (64), Expect = 5e-05
 Identities = 19/53 (35%), Positives = 25/53 (47%)

Query: 13  VRVDAHDAKLNRARLIGANLRGANLTGAELVGADFTGSNLENAILHGADISGA 65
           VR +     L R  L   +L   +L+GA L GA   G+N     L  AD+S A
Sbjct: 258 VRTEDLTIDLRRVNLQRFDLSNLDLSGAALSGAHLQGANCIGTNLRNADLSFA 310