Pairwise Alignments

Query, 953 a.a., excinuclease ABC, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 961 a.a., Excinuclease ABC subunit A from Pseudomonas syringae pv. syringae B728a

 Score = 1187 bits (3070), Expect = 0.0
 Identities = 598/947 (63%), Positives = 744/947 (78%), Gaps = 10/947 (1%)

Query: 6   KIEVRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR 65
           KI +RGAR HNLK+ID+ +PRD+L+VITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYAR
Sbjct: 20  KILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 79

Query: 66  QFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGTPYSPA 125
           QFL MM+KPDVD I GLSPAISIEQK+TS NPRSTVGT+TEIYDY+RLL+ARVG P  P 
Sbjct: 80  QFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRCPD 139

Query: 126 TGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIIRDRKGEYRKEFLELRKQGFQRVKVDGA 185
             +P+EAQ V  MVD V++  EG++  LLAP+IR+RKGE+   F ELR QGF R +V+G 
Sbjct: 140 HDIPLEAQTVSQMVDLVLSQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVNGK 199

Query: 186 FHDLDSPPTLDKKFRHDIDVVVDRIVVKEGIETRLADSFRTALDLADGIAILETAPTEGE 245
             +LD  P LDK+ +H IDVVVDR  V+  ++ RLA+SF TAL LADGIA++  AP + E
Sbjct: 200 LCELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALV--APMDDE 257

Query: 246 P-ERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDERLVVPDATL 304
           P E   FS +FACP+ G  I E+EP+LFSFN P GACP CDGLGV+ FFD + +V +A L
Sbjct: 258 PGEEVIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLV-NAEL 316

Query: 305 TLANGALAPWRKGKSPYFLQTINAIAKHYEFDPKTPWKALPEKVQEVFLRGSGEEEITFR 364
           TLA GA+  W + ++ Y+ Q + +++KHY F  + P+K +P  +Q++ L GSG + + FR
Sbjct: 317 TLAEGAIRGWDR-RNVYYFQMLGSLSKHYGFSLEMPFKQIPADMQKILLNGSGSQSVDFR 375

Query: 365 Y-DEGGRVYQVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRSCGTCGGYRLRPEAL 423
           Y ++ G + + +  FEG++PN+ERRYRET+S+ +REE  ++   + C  C G RLR EA 
Sbjct: 376 YLNDRGDIVKRAHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREAR 435

Query: 424 AVKIAGLHVGEVVQMSIREAHDWCRTVPEHLSVQKNEIARAILKEIRERLGFLNNVGLEY 483
            V +    +  V  + I +A  +  T+   L+ ++ EIA  ILKEIRERL FL NVGL+Y
Sbjct: 436 HVWVGEKTLPAVTSLPIGDATHYFETLK--LTGRRGEIADKILKEIRERLQFLVNVGLDY 493

Query: 484 LTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNLRDQ 543
           LTL R+A TLSGGE+QRIRLASQIG+GL GV+Y+LDEPSIGLHQRDNDRLL TLK+LRD 
Sbjct: 494 LTLDRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLRDI 553

Query: 544 GNTVIVVEHDEEAVREADYVFDIGPGAGVHGGQVVAHGTPAQIMANPASITGDYLAGRRE 603
           GNTVIVVEHDE+A+R ADYV DIGPGAGVHGG +VA GTP ++M++P S+TG YL+GR +
Sbjct: 554 GNTVIVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPDEVMSHPDSLTGKYLSGRVK 613

Query: 604 IPVPATRRKGNKK-KVTVRKATGNNLQDLTVDFPLGKFVCVTGVSGGGKSTLTIETLFKT 662
           I VPA R   NKK  +T++ A GNNLQ++ +D P+G   CVTGVSG GKSTL   TLF  
Sbjct: 614 IAVPAKRTPRNKKLSLTLKGARGNNLQNVNLDIPIGLLTCVTGVSGSGKSTLINNTLFPL 673

Query: 663 ASMRLNGARQTPAPC-ETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFAG 721
           ++  LNGA    A   ++I GL+HLDKV+DIDQ PIGRTPRSNPATYTG FTPIR+ FAG
Sbjct: 674 SATALNGATTLEAATHDSINGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAG 733

Query: 722 LPEARTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGKRYNRETLE 781
           +PE+R+RGY PGRFSFNVKGGRCEACQGDG+IK+EMHFLPD+YV C+ CK KRYNRETLE
Sbjct: 734 VPESRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLE 793

Query: 782 VTFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQR 841
           V +KGK+I +VL+MT+E+A+EFF AVP++  K+  LM VGL YIK+GQ ATTLSGGEAQR
Sbjct: 794 VKYKGKNIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQR 853

Query: 842 VKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHNLDVIKT 901
           VKLS+EL+KR TG+TLYILDEPTTGLHF D+++LL+VLH L + GNTVVVIEHNLDVIKT
Sbjct: 854 VKLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKT 913

Query: 902 ADWLIDIGPEGGDGGGTLVATGTPEQVAEVAESHTGRYLKPMLAGAK 948
           ADWL+D+GPEGG  GG ++ATGTPEQVAE+ +S+TG YLKP+L   K
Sbjct: 914 ADWLVDLGPEGGSRGGQIIATGTPEQVAEMEQSYTGHYLKPLLTRDK 960