Pairwise Alignments

Query, 512 a.a., amino acid carrier protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 495 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  197 bits (500), Expect = 9e-55
 Identities = 155/461 (33%), Positives = 220/461 (47%), Gaps = 31/461 (6%)

Query: 55  PWIVLWLVVAASIFTVYFGFIQLRGFVHSIKLVKGDYADPDDAGEVSHFQALATALSGTV 114
           P +V   +     F++   F+QLR     I+L+    +   DAG VS FQALA  L+G V
Sbjct: 15  PALVYLCLGVGLFFSLRSRFLQLRHLPEMIRLMFDGKST--DAG-VSSFQALAMTLAGRV 71

Query: 115 GLGNIAGVAVAVGIGGPGATFWMIFAGLLGMASKFTECTLGVKYRNEYPDGTVSGGPMYY 174
           G GNIAGVA A+  GGPGA FWM     LG +S F E TLG  Y+ E  +G   GGP +Y
Sbjct: 72  GTGNIAGVATAITFGGPGALFWMWMVAFLGASSAFVESTLGQVYK-EKINGEYRGGPAFY 130

Query: 175 ISKGFAEKGMPGGKFMAVLFSIFCILGALGGGNMFQANQAHAQISGIVGDYPGWITGIIF 234
           I KG   K       +A +F+   +L  +      QAN   A +       P  +T  + 
Sbjct: 131 IEKGLGMKWYAWTFAIATIFACGVLLPGV------QANSIGASLKTAFDIDPN-VTAAVL 183

Query: 235 AAVVFAVIVGGIKSIAKVTEKVVPFMGILYVAAALVILLVNIDQIGWAFGQIFEGAFTGL 294
           A ++  +I GG+K IA     VVPFM + Y+  A VI+ +NIDQ+      I + AF   
Sbjct: 184 AMLLGFIIFGGVKRIANFATLVVPFMALGYIIVACVIIALNIDQLPGILWLIIKSAFGFD 243

Query: 295 GVAGGFVG-ALIQGFKRAAFSNEAGVGSAAIAHSAVKTKEPVTEGYVSLLEPFIDTVVIC 353
              G  +G A++ G KR  +SNEAG G+   A SA     P  +G V     +IDT+ +C
Sbjct: 244 AGFGAILGLAIMWGVKRGVYSNEAGQGTGPHASSAAAVTHPAKQGLVQAFSVYIDTLFVC 303

Query: 354 TMTALVITISGQLMINPDTGLYMVE--NGAIMTVDGNSGVALTSAAFATGF-SWFP---- 406
           + T  ++ I         TGLY V+  +GA +   G +GVA  S    T   S  P    
Sbjct: 304 SATGFMLLI---------TGLYNVQGPDGAAL-YTGIAGVAAGSGYVQTAMESMMPGFGN 353

Query: 407 YVLAIAVVLFAFSTMISWSYYGLKAWTYLFGEGRTKEL--VFKVIFCVFVVIGAAASLGP 464
             +AIA+  FAF+T++++ Y       Y+  +     L  + KVI     V G   +   
Sbjct: 354 MFVAIALFFFAFTTIVAYYYIAETNIAYINRKVNRPWLTVMLKVIIMASTVYGTVKTADL 413

Query: 465 VIDFSDAAIFAMAVVNIAALYVLMPVVKAELASYRARLDSG 505
                D  +  MA +NI A+ +L  V    L  Y ++   G
Sbjct: 414 AWGMGDIGVGIMAWLNIIAIILLQKVAFTCLKDYESQQKQG 454