Pairwise Alignments

Query, 512 a.a., amino acid carrier protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 452 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  283 bits (725), Expect = 7e-81
 Identities = 181/476 (38%), Positives = 257/476 (53%), Gaps = 45/476 (9%)

Query: 34  FAAVTGPFVGLIFAPLPGTSFPWIVLWLVVAASIF-TVYFGFIQLRGFVHSIKLVKGDYA 92
           F A+     G+++ P        I L L+V   ++ T     IQ+     ++ L+   + 
Sbjct: 3   FQALLSSLNGIVWGP--------ITLCLLVGTGVYLTTRLKLIQVFRLPMALSLL---FK 51

Query: 93  DPDDAGEVSHFQALATALSGTVGLGNIAGVAVAVGIGGPGATFWMIFAGLLGMASKFTEC 152
                G++S F AL TALS T+G GNI GVA A+ +GGPGA FWM  A   GMA+K+ EC
Sbjct: 52  PAKGHGDLSSFAALCTALSATIGTGNIVGVATAIKMGGPGALFWMWLAAFFGMATKYAEC 111

Query: 153 TLGVKYRNEYPDGTVSGGPMYYISKGFAEKGMPGGKFMAVLFSIFCILGALGGGNMFQAN 212
            L VKYR     G ++GGPMYYI +G       G ++MA LF++F +  A  G   F   
Sbjct: 112 MLAVKYRTTDARGQIAGGPMYYIERGL------GLRWMAKLFALFGVGVAFFGIGTFAQV 165

Query: 213 QAHAQISGIVGDYPGWITGIIFAAVVFAVIVGGIKSIAKVTEKVVPFMGILYVAAALVIL 272
            A +    I  D P W T ++   +V AV +GG+K I+ V +K+VP M I YV A + IL
Sbjct: 166 NAISDALTIAFDVPTWTTALVLTLLVAAVTLGGVKRISNVAQKLVPAMSIGYVLACVWIL 225

Query: 273 LVNIDQIGWAFGQIFEGAFTGLGVAGGFVGALI-----QGFKRAAFSNEAGVGSAAIAHS 327
           L   + I  A   + E AFT +  AGGF+GA +      G  R  FSNE+G+GSA IA +
Sbjct: 226 LGFAEAILPALQLVVESAFTPVSAAGGFLGATVAQAIQMGIARGVFSNESGLGSAPIAAA 285

Query: 328 AVKTKEPVTEGYVSLLEPFIDTVVICTMTALVITISGQLMINPDTGLYMVENGAIMTVDG 387
           A KT EPV +G VS+   F DT++ICTMT LV+ I+G  + + DT               
Sbjct: 286 AAKTNEPVEQGLVSMTGTFFDTIIICTMTGLVLIITG--VWSGDT--------------- 328

Query: 388 NSGVALTSAAFATGFSWF--PYVLAIAVVLFAFSTMISWSYYGLKAWTYLFGEGRTKELV 445
            +G A+TSAAF+ G S     Y++ IA+V FAF+T++ W YYG + W YL GE   +   
Sbjct: 329 -AGAAMTSAAFSLGGSAAIGQYLVTIALVCFAFTTILGWHYYGERCWYYLVGERGLR--A 385

Query: 446 FKVIFCVFVVIGAAASLGPVIDFSDAAIFAMAVVNIAALYVLMPVVKAELASYRAR 501
           ++++F   +  GA   L  +   +D     MA+ N+ A+  L  ++ AE  SY  R
Sbjct: 386 YQIVFLGLIAGGAFIKLDVIWLLADTVNGLMAIPNLIAIIGLRHIIIAETQSYFVR 441