Pairwise Alignments

Query, 392 a.a., putative nitrate transport protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 356 a.a., Nitrate ABC transporter, nitrate-binding protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  192 bits (489), Expect = 1e-53
 Identities = 116/365 (31%), Positives = 181/365 (49%), Gaps = 26/365 (7%)

Query: 6   LNIGYLPLVDAAPLIIAQKMGFADTEGIRLALHKQPSWSALRDGVALGTLDAGHMLSPLP 65
           L + Y+PL+D APL+ A ++G     G++L LH+Q SW+ +RD +  G +DA H L+ L 
Sbjct: 9   LRVAYMPLIDCAPLVAASRLGLDHAYGLQLQLHRQASWAGVRDRLLAGEVDAAHTLASLV 68

Query: 66  VAMSLGLGGLPTAMDALLVMSVNGNVIGVSNGLASKMRSNGWREDFRDPLATGKHLIRAS 125
            A+ LG+GG    M  L+ ++ NG  I ++  LA  + +         PL     ++  +
Sbjct: 69  YAIDLGVGGPQCPMALLMTLNHNGQAITLAPALAQGVAAG-------QPLP---QVLAEA 118

Query: 126 GRKLRIGVPFPFSMHAELVYFWLNALGLKTPDELDVRTVPPPHMADAIAANEIDAFCVGE 185
           GR++     FP   HA  +Y+WL A G+    ++DV ++PPP M +A+A+  +D +C GE
Sbjct: 119 GRRVVFAQTFPTGTHALWLYYWLAACGVDPMRDVDVVSIPPPQMPEALASGLVDGYCSGE 178

Query: 186 PWGSIAVETGVGELILPANSIWTFSPEKVLAARRDWIETNPAETRALMRAVVTAARWL-G 244
           PW ++A   G G+ ++ +  +W   PEKVLA RR++    P  +  L   V+ A RWL  
Sbjct: 179 PWAAVAEAQGSGQRVIRSGELWPEHPEKVLACRREFAALQPELSERLTACVLEACRWLDA 238

Query: 245 DPENRLVASEILAQPGLIDVPSEVIDRAL---SGQITSKPKALAHRVPRFLEFH-ASAAN 300
            P NR   ++ LA P  I VP+  +   L   +  ++  P ALA        FH   A N
Sbjct: 239 APANRAQCAQWLADPDYIGVPAAHLAACLDADAATVSVDPSALA--------FHRGGAVN 290

Query: 301 FPWRSQAAWIASNIAARVGLDRTEAMRISMA--CYRSDLYRANLTDLGLDMPGASAKMEG 358
            PW S   W       R G    +A  ++     +R D YR      G+  P A  ++  
Sbjct: 291 MPWLSDGEWFLEQF-QRWGWHTLQAADLARLHDIHRLDNYRRAAQRAGVTAPDADRRINR 349

Query: 359 ALAQP 363
               P
Sbjct: 350 LFDTP 354