Pairwise Alignments

Query, 392 a.a., putative nitrate transport protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 386 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  196 bits (497), Expect = 1e-54
 Identities = 120/346 (34%), Positives = 186/346 (53%), Gaps = 15/346 (4%)

Query: 6   LNIGYLPLVDAAPLIIAQKMGFADTEGIRLALHKQPSWSALRDGVALGTLDAGHMLSPLP 65
           L IG++PLVDAA LI+A   GF   EG+ + L ++ SW+ +RD   +G  DA H+L+PL 
Sbjct: 5   LRIGFIPLVDAAALIVAADKGFCAAEGLDVELVREISWANVRDKFNIGLFDAAHLLAPLA 64

Query: 66  VAMSLGLGGLPTAMDALLVMSVNGNVIGVSNGLASKMRSNGWREDFRDPLATGKHLIR-- 123
           VA SLG+G +   + +   + VNGN I VS  L + + +     D  DPL +G+ L R  
Sbjct: 65  VASSLGIGHVKVPVISGFGLGVNGNAITVSPDLHAAIVAMA-DGDVADPLVSGRALARVV 123

Query: 124 ----ASGRK-LRIGVPFPFSMHAELVYFWLNALGLKTPDELDVRTVPPPHMADAIAANEI 178
               A G++ L  G+ FPFS H   + FW+ A G+   +++ +  +PPP M +++A+  +
Sbjct: 124 AERRAKGQEPLTFGMTFPFSSHNYDLRFWMGAGGVDPDEDVRLVVLPPPFMVESLASKHL 183

Query: 179 DAFCVGEPWGSIAVETGVGELILPANSIWTFSPEKVLAARRDWIETNPAETRALMRAVVT 238
           D FCVG PW S+A++ G+G ++   + ++  + EK+L  R +W   +P   +AL+RA   
Sbjct: 184 DGFCVGAPWNSVAIDLGIGTILHFTSELFQRAAEKMLTVRANWAAQHPEVLKALIRAHAR 243

Query: 239 AARWLGDPENRLVASEILAQPGLIDVPSEVIDRALSGQITSKPKALAHRVPRFLEFHASA 298
           AA ++ D  NR     +L  PG I+V  E+I R L G++            R+L     A
Sbjct: 244 AADYIEDVANRDEVCALLTAPGRIEVAPELIRRTLDGRLKVAADGTLRTSDRYLLVGRGA 303

Query: 299 ANFPWRSQAAWIASNIAARVGLDR----TEAMRISMACYRSDLYRA 340
           A  P   Q AW   N A  V   +     + +  + A +R DLY A
Sbjct: 304 AARPDPVQGAW---NYAQMVRWGQAPLSADLLAAAKAVFRPDLYDA 346