Pairwise Alignments

Query, 392 a.a., putative nitrate transport protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 462 a.a., CmpA/NrtA family ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  146 bits (369), Expect = 1e-39
 Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 24/314 (7%)

Query: 1   MSRAPLNIGYLPLVDAAPLIIAQKMGFADTEGIRLALHKQPSWSALRDGVALGTLDAGHM 60
           + +  L +G++P+  A P+I+A  MGF    G+ + + K   W+ +RD       DA HM
Sbjct: 104 LEKTDLKVGFIPITCATPIIMAHPMGFYAKYGLNVEVIKTAGWAVIRDKTLNKEYDAAHM 163

Query: 61  LSPLPVAMSLGLGGLPTAMDALLVMSVNGNVIGVSNGLASKMRSNGWREDFRDPLATGKH 120
           LSP+P+A+++G+G  P       V ++NG  I ++     +     W+            
Sbjct: 164 LSPMPLAITMGVGSNPIPYTMPAVENINGQAITLAMKHKDRRNPKDWKG----------- 212

Query: 121 LIRASGRKLRIGVPFPFSMHAELVYFWLNALGLKTPDELDVRTVPPPHMADAIAANEIDA 180
                    +  VPF +SMH  L+ ++L   GL    ++ +R VPPP M   + A+ ID 
Sbjct: 213 --------FKFAVPFDYSMHNYLLRYYLAEHGLDPDVDVQIRAVPPPEMVANLRADNIDG 264

Query: 181 FCVGEPWGSIAVETGVGELILPANSIWTFSPEKVLAARRDWIETNPAETRALMRAVVTAA 240
           +   +P    AV  GVG + +    IW   P    AA ++++ T P    AL+++++ A 
Sbjct: 265 YLAPDPMNQRAVYDGVGFIHILTKEIWDGHPCCAFAASKEFVTTMPNTYGALLKSIIEAT 324

Query: 241 RWLGDPENRLVASEILAQPGLIDVPSEVIDRALSGQITSKPKALAHRVPRFLEFHASAAN 300
            +   PENR   ++ ++    ++ P+ V+++ L+G        +  + P  ++F      
Sbjct: 325 AYAHKPENRKEIAQAISPANYLNQPAIVLEQILTGTYADGLGNVV-KQPNRIDFDP---- 379

Query: 301 FPWRSQAAWIASNI 314
           FPW+S A WI + +
Sbjct: 380 FPWQSFAIWIMTQM 393