Pairwise Alignments

Query, 392 a.a., putative nitrate transport protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 363 a.a., nitrate/nitrite transport system substrate-binding protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  195 bits (496), Expect = 2e-54
 Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 17/347 (4%)

Query: 6   LNIGYLPLVDAAPLIIAQKMGFADTEGIRLALHKQPSWSALRDGVALGTLDAGHMLSPLP 65
           L +G++ L DAAPL+ A+ + F    G+ L L +QPSW+A+RD +  G LDA H L  L 
Sbjct: 1   LRLGFVALADAAPLVAAKLLEFGHAHGLTLELSRQPSWAAVRDKLLSGDLDAAHTLYGLV 60

Query: 66  VAMSLGLGGLPTAMDALLVMSVNGNVIGVSNGLASKMRSNGWREDFRDPLATGKHLIRAS 125
             + LGLGG  T M  L+V++ NG  + +S+ LA  +  +G   +    LAT        
Sbjct: 61  YGVQLGLGGPQTDMAVLMVLNRNGQAVTLSSRLADALAEHG---NLPKALAT-------L 110

Query: 126 GRKLRIGVPFPFSMHAELVYFWLNALGLKTPDELDVRTVPPPHMADAIAANEIDAFCVGE 185
           GRK      FP   HA  +Y+WL A G+    +++   +PPP M  A+A +++D  CVGE
Sbjct: 111 GRKPVFAQTFPTGTHAMWLYYWLAAQGVHPLRDIESVVIPPPQMVAALAEDKLDGLCVGE 170

Query: 186 PWGSIAVETGVGELILPANSIWTFSPEKVLAARRDWIETNPAETRALMRAVVTAARWLGD 245
           PW ++A   GVG  +   + +W   PEKVLA RRD++   P   RAL++ ++ A RWL  
Sbjct: 171 PWNAMAEAEGVGRTVAYTSEVWPDHPEKVLACRRDFVSAYPNTARALVQTMLEACRWLDG 230

Query: 246 PENRLVASEILAQPGLIDVPSEVIDRALSGQI-TSKPKALAHRVPRFLEFHASAANFPWR 304
           P +R   +  LA+P  I +   +I      +I  S P+ L  R      F     N+P  
Sbjct: 231 PGHRTEIARWLARPDYIGIDEALIAARFGDKIPASVPRGLPMRF-----FDNGEVNYPHA 285

Query: 305 SQAAWIASNIAARVGLD-RTEAMRISMACYRSDLYRANLTDLGLDMP 350
            + AW  +       +D R++  +I+ +  ++ LYR     + + +P
Sbjct: 286 FEGAWFLTQFERWGMIDARSDYTQIAESINQTQLYREAAAQVKVAVP 332