Pairwise Alignments

Query, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 350 a.a., recombinase RecA from Pseudomonas fluorescens FW300-N2E3

 Score =  446 bits (1147), Expect = e-130
 Identities = 222/321 (69%), Positives = 270/321 (84%), Gaps = 1/321 (0%)

Query: 16  DKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRIIE 75
           +K+KAL +AL QIERQFGKG++M++G D     I A STGS+GLDIALGIGG+PKGRI+E
Sbjct: 4   NKKKALAAALGQIERQFGKGAVMRMG-DQDRQAIPAISTGSLGLDIALGIGGLPKGRIVE 62

Query: 76  IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 135
           IYGPESSGKTTLTL  IA+ QK G  CAFVDAEHALDP+YA KLGV++D+LL+SQPDTGE
Sbjct: 63  IYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGE 122

Query: 136 QALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAIS 195
           QALEIT+ LVRS AV +++VDSVAAL PK+E+EG+MGD  VG QARLMSQA+RK+TG I 
Sbjct: 123 QALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIK 182

Query: 196 RSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTTK 255
            +NC VIFINQIRMKIGVMFGSPETT+GGNALKFY+SVRLDIRR G+VK+ DE+VG+ T+
Sbjct: 183 NANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETR 242

Query: 256 VKVVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGRE 315
           VKVVKNKVA PF+Q EF I+YG+GI   GE+IDLGV  G V+KSG+W++Y   +IGQG+ 
Sbjct: 243 VKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKA 302

Query: 316 NAKQYLRDNTRTALELEDKIR 336
           N+ ++L+DN   A  LE +IR
Sbjct: 303 NSAKFLQDNPDIAATLEKQIR 323