Pairwise Alignments

Query, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 358 a.a., recombinase RecA from Burkholderia phytofirmans PsJN

 Score =  476 bits (1224), Expect = e-139
 Identities = 230/344 (66%), Positives = 293/344 (85%), Gaps = 3/344 (0%)

Query: 15  ADKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRII 74
           A+K KAL +ALAQIE+QFGKGS+M+LGA   V +I+  STGS+GLDIALG+GG+P+GR++
Sbjct: 13  AEKSKALAAALAQIEKQFGKGSVMRLGAGEAVEDIQVVSTGSLGLDIALGVGGLPRGRVV 72

Query: 75  EIYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTG 134
           EIYGPESSGKTTLTL  +AE QK GG  AF+DAEHALD QYA KLGV+++ELL+SQPDTG
Sbjct: 73  EIYGPESSGKTTLTLQVVAEMQKLGGTAAFIDAEHALDIQYAGKLGVNVNELLVSQPDTG 132

Query: 135 EQALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAI 194
           EQALEI + LVRSG++ M+V+DSVAAL PK+E+EG+MGD+  G QARLMSQA+RKLTG I
Sbjct: 133 EQALEIADALVRSGSIDMIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTI 192

Query: 195 SRSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTT 254
            R+NC VIFINQIRMKIGVMFG+PETT+GGNALKFY+SVRLDIRRIGS+K  DE++GN T
Sbjct: 193 KRTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKKNDEVIGNET 252

Query: 255 KVKVVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGR 314
           +VKVVKNKVAPPF++  FDI+YGEGIS+ GE+IDLGV+A +V K+G+W+SY  ERIGQG+
Sbjct: 253 RVKVVKNKVAPPFREAIFDILYGEGISRQGEIIDLGVQAKIVDKAGAWYSYSGERIGQGK 312

Query: 315 ENAKQYLRDNTRTALELEDKIRAAHGLDFQ---MPDSEAEILDD 355
           +NA+++LR+N   A E+E++IR + G++     +  + AE+ D+
Sbjct: 313 DNAREFLRENPDIAREIENRIRESLGVNAMAEAVTGAAAEVADE 356