Pairwise Alignments

Query, 400 a.a., 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 384 a.a., bifunctional enzyme, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, 4-diphosphocytidyl-2C- methyl-D-erythritol synthase (NCBI) from Rhodospirillum rubrum S1H

 Score =  331 bits (849), Expect = 2e-95
 Identities = 189/379 (49%), Positives = 236/379 (62%), Gaps = 6/379 (1%)

Query: 23  VTAILVAAGRGTRAGGGLAKQWRPLGARRVIDWTLAAFDRATQVSELLVVLHPEDMDL-- 80
           V A++VAAGRG R GG L KQ++ LG R ++  TLA F     V+ +  ++HPED DL  
Sbjct: 4   VAALIVAAGRGKRFGGDLPKQYQTLGGRPILRHTLARFAAHPDVALVRAIIHPEDRDLYG 63

Query: 81  AATLTAAKPLRCVSGGATRSASVACALAAVADPEA-IVLIHDAARPVVSADLIARVVAGV 139
           AA    A  L  V GGA R  SV   L ++ D     VLIHD ARP+V   LI RV+A +
Sbjct: 64  AAAHGLATLLDAVEGGAERQDSVRLGLESLTDVAPDYVLIHDGARPLVDGALIDRVIAAL 123

Query: 140 IETGAAAPALPVVDALWTGAGDRVTGMQPRDGLYRAQTPQGFHAGAIRDAHAAATGAA-A 198
            +   A PAL V D L  GAG  +     R GL+RAQTPQGF   AI  AH A  G    
Sbjct: 124 ADHPGAIPALAVADTLKRGAGGMIGQTVDRAGLWRAQTPQGFRYDAILAAHRAQAGTMLT 183

Query: 199 DDVEIARAAGMPVAIVAGDEQNFKITYPQDFARAAALLKERDKMDIRTGNGYDVHRFGTG 258
           DD  +  AAG  VA+V G E N KIT   D  RA  L   R + + R G+G+DVHR G G
Sbjct: 184 DDAAVLEAAGGAVALVDGAEDNAKITTFADLERAERLF--RGEGEQRIGSGFDVHRLGPG 241

Query: 259 DAVILCGVEVPHDRALMGHSDADVGMHAVTDAIYGALGDGDIGQHFPPSDPQWKGAASEI 318
           D V L G+ +PH   L+GHSDAD  MHA+TDA+ G L  GDIG+HFPPSD +WKGA S I
Sbjct: 242 DFVTLNGIRIPHSHGLVGHSDADAPMHALTDALLGCLNAGDIGRHFPPSDMRWKGADSAI 301

Query: 319 FLRHAVALAAERGYTITHMDCTLVCERPKIGPYHAVMKAKMSELMGLQPDQVSVKATTSE 378
           FLRHA AL    G  I ++D T++CE+PKIGP+ A M A+++E++ +   +V+VKATT+E
Sbjct: 302 FLRHAAALITALGGRILNVDITILCEQPKIGPHRARMSARLAEILEISATRVAVKATTTE 361

Query: 379 RLGFTGREEGIAALATVTL 397
            LGFTGR EGIAA AT  +
Sbjct: 362 ELGFTGRGEGIAAQATALI 380