Pairwise Alignments

Query, 333 a.a., putative TIM-barrel protein, nifR3 family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 356 a.a., tRNA dihydrouridine synthase DusB from Ralstonia solanacearum GMI1000

 Score =  249 bits (636), Expect = 7e-71
 Identities = 135/281 (48%), Positives = 172/281 (61%), Gaps = 2/281 (0%)

Query: 10  LANPVLLAPMAGITDLPFRNVVSRFGAGLVVSEMVASQEMVQAKASVRARAELGFGAQAT 69
           L N + +APMAG+TD PFR +  R GAG  VSEMVAS   +        RA      +  
Sbjct: 8   LRNNLFVAPMAGVTDRPFRQLCKRLGAGYAVSEMVASNAQLWKSERTMRRANHTGEVEPI 67

Query: 70  AVQLAGREAYWMGEAARYVADQGARVIDINMGCPAKKVVNGASGSALMRDLDHALTLIDA 129
           AVQ+AG E   M EAARY  ++GA++IDINMGCPAKKV N A+GSAL+++      +++A
Sbjct: 68  AVQIAGAEPMMMAEAARYNVERGAQIIDINMGCPAKKVCNVAAGSALLQNEPLVARIVEA 127

Query: 130 VVAAVD--VPVTLKTRLGWDDDCLNAPDLARRAEAAGIAMVTIHGRTRCQFYKGAADWTA 187
           VV AV   VPVTLK R GWD +  NA  +AR A+ AGI+M+T+HGRTR   Y G A++  
Sbjct: 128 VVGAVGDRVPVTLKIRTGWDREHRNALTVARIAQEAGISMLTVHGRTRADLYHGEAEYET 187

Query: 188 IGRVKRAVSIPVIANGDIVDTAAAAQARAASGADGLMVGRGAQGRPWRLAEIAAALYGAP 247
           I  VK +V IPV+ANGDI   A A      +GAD +M+GR AQGRPW   EI   L    
Sbjct: 188 IAAVKASVRIPVVANGDIGTPAKARHVLEVTGADAIMIGRAAQGRPWLFREIEHFLKTGT 247

Query: 248 APDIPSGDALVDLVLAHFEAMLAFYGPELGLRTARKHLGWY 288
               P  + +  ++  H E   AFYG   G+RTARKH+ WY
Sbjct: 248 LLPAPEVEEIRGIMNTHLEEHYAFYGEYTGVRTARKHIAWY 288