Pairwise Alignments

Query, 287 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 273 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 2/216 (0%)

Query: 62  LSAPLDTMGTVGALAVDPAAWEIAALTLQRALSGFFLVAAAGTALGVAAGYFPAILRLVT 121
           + AP +   T+  LA + A W+  + +L R L GF + A+         G        + 
Sbjct: 52  MPAPSEIAVTLTDLA-EGALWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLE 110

Query: 122 PLVTVLLGVPPIAWIVLAMIWFGGSDATVRTVILISALPVVFMGAARGITTRDRRLDRLA 181
           P    L  +P +AW+ L ++W G  + +   +I I A   V++     I   DR+L  + 
Sbjct: 111 PTFAGLRSIPSLAWVPLLLLWLGIDETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVG 170

Query: 182 EAFGAGPLRRFLTMGLRQTTTTLFPALALALGTAFKVAVMAELLANAGGIGGALADARIN 241
           + +G    R    + L      LF  L   L  A+   V AEL+A   G+G  L+D R  
Sbjct: 171 QMYGFNRRRLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIAATKGLGYLLSDGRET 230

Query: 242 LDIELALAWVLIAVTLLIAVEYTLVQPVKAEIDRWR 277
              ++ LA  +I + LL  V   L+  ++     WR
Sbjct: 231 SRPDIVLA-AIIVLALLGKVSDGLLAALEKRCLAWR 265