Pairwise Alignments

Query, 402 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  100 bits (248), Expect = 8e-26
 Identities = 87/343 (25%), Positives = 144/343 (41%), Gaps = 56/343 (16%)

Query: 45  LMQRFVIFGIFAIGFNILFGLTGYLSFGHAAFLGVGSYAA-IWMMKLLTMNVIPAIIMAI 103
           L+ R     +  +  +++ G  G  + GHAA  G G+YAA I  +     + +  +   I
Sbjct: 45  LLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGIAAVHFGITDPLLMLAAGI 104

Query: 104 VLAGLFSLLVGWISLRRSGIYFSILTLAFAQMSYALAYSVLTPITGGETGLQPKVNDPRL 163
           +   L  L  G + LR  G+   +L++A   + +  A +  +  TGG  GL     DP  
Sbjct: 105 LGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFA-NKASSWTGGSDGLAGISPDP-- 161

Query: 164 LDPALAEGATPSANLFGLTMKSSYELNVGGWLFTFNAGYYLAAVIMLISFYVAIRIFRSP 223
                         L GL     +  ++ G        Y    V++ I F +   + RSP
Sbjct: 162 --------------LIGL-----FAFDLWG-----RTAYVFGVVLLAIVFVLLRLVVRSP 197

Query: 224 FGMMLRAVKSNQQRMNYTGLNSKPYTLAAFVISGMYAGLAGGLMVAMDTQVGPERMFWTA 283
           FGM+ R ++ +  R+   G +     L  +VISG  AG+ G L       VG + + +T 
Sbjct: 198 FGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTL 257

Query: 284 SGEVVLMTILGGAGTLIGPVLGAGMIKYMENIISKINETILHQWFAFLPDGMEDALVAMV 343
           S E ++M +LGG G+L G + G  +  + E+++S  N                       
Sbjct: 258 SAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTAN----------------------- 294

Query: 344 YPFIGKGWHLTLGIIFMLVVIFLPGGLV-EGGQRIARLFGRGK 385
            PF    W   +G + + VV+F P GL     + +AR  G G+
Sbjct: 295 -PF---HWLTMVGALLIAVVLFAPKGLYGTVAEVLARRRGAGR 333