Pairwise Alignments

Query, 402 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 356 a.a., branched-chain amino acid transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  135 bits (340), Expect = 2e-36
 Identities = 111/367 (30%), Positives = 166/367 (45%), Gaps = 40/367 (10%)

Query: 10  VLLLIVAGLTMLAPFLLNPFPEGSGMAQFNAGYPDLMQRFVIFGIFAIGFNILFGLTGYL 69
           +LL+++      APFL   FP             D   R  IF +    +++L G  G +
Sbjct: 18  LLLVVILICLAFAPFL---FP--------GVRTVDTAARICIFIVLVASYDLLLGYGGIV 66

Query: 70  SFGHAAFLGVGSYAAIWMMKLLTMNVIPAIIMAI---VLAGLFSLLVGWISLRRSGIYFS 126
           SF H  F G+G+Y        +        I AI    LA + +LL+G  SLR   I+F+
Sbjct: 67  SFAHTMFFGMGAYGVALTSTHMGRGFDALAIGAISGAALAAVLALLIGLFSLRVRAIFFA 126

Query: 127 ILTLAFAQMSYALAYSVLTPITGGETGLQPKVNDPRLLDPALAEGA-TPSANLFGLTMKS 185
           ++TLA A  + A+  S L+ +TGGE GL  K   PR L PA   G  T    LFG+ +  
Sbjct: 127 MITLAVAS-AVAVLVSQLSGLTGGEDGLTFKT--PRELGPAFKFGKETFDGTLFGVKLN- 182

Query: 186 SYELNVGGWLFTFNAGYYLAAVIMLISFYVAIRIFRSPFGMMLRAVKSNQQRMNYTGLNS 245
                  G L T    YYL      + F   +R+  SPFG +L+A++ N  R    G   
Sbjct: 183 -------GKLLT----YYLIFGGSALLFLALLRVVNSPFGRVLQAIRENDFRAEAIGYRV 231

Query: 246 KPYTLAAFVISGMYAGLAGGLMVAMDTQVGPE-RMFWTASGEVVLMTILGGAGTLIGPVL 304
             Y + A  +S   A L+G L       VGP+  +  T   +++LM ++GG GT+ G V+
Sbjct: 232 VYYRVTATCLSAAIAALSGSLYAIWLRYVGPDTTLSMTIMIDILLMVVIGGMGTIYGAVI 291

Query: 305 GAGMIKYMENIISKINETILHQWFAFLPDGMEDALVAMVYPFIGKGWHLTLGIIFMLVVI 364
           GA +    +N +  +   +           M + L  +        W L LG++F+L V 
Sbjct: 292 GATLFVLAQNYLQNLMGVL---------SSMTEGLPLLPELLSPDRWLLWLGVLFILSVY 342

Query: 365 FLPGGLV 371
           F P G+V
Sbjct: 343 FFPSGVV 349