Pairwise Alignments

Query, 333 a.a., permease protein of ABC transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 325 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

 Score = 56.6 bits (135), Expect = 8e-13
 Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 21/282 (7%)

Query: 7   SLLAIALVCGASAASAENAKVVFGTNWLAQAEHGGFYQSVADGTYAACGLDVEIIS--GG 64
           +LLA AL+   S ++    KV +  +WL   +    Y  V  G +AA G+DVEI S  GG
Sbjct: 5   TLLASALLALFSQSALAADKVRWLNDWLPAGDKAAIYLGVEQGLFAAEGIDVEIASARGG 64

Query: 65  PQVNNRALMLAGRIDYHMGG--DMLQAFNAVKEDIPVVMVAATFQKHPQVILAHPGEA-D 121
             V  +  +     D+   G   +LQA    + ++PVV VA  + K P       G   +
Sbjct: 65  SDVVTK--LATNSADFGSAGLASLLQA--KAQGEVPVVAVAPIYNKQPDAFFTTEGSGIE 120

Query: 122 SWEELKDLTLLIGD-NGFTSYYQWMIAEHGFTVEQRQPYTFNP---APFIADKRVGMQ-G 176
           S++++   T+     +     +  ++  +G      +    +P   AP +A  +V     
Sbjct: 121 SFKDIVGKTVATPTFSASNVVWPLLLERNGIDPASVKLLKLDPGALAPMLATGKVDATIN 180

Query: 177 YLSSEPFAVEK--EAGFKPNVFLIADAGFSSYATMVETMQATIDEKPEQVKCFVEGSIKG 234
           +L+  P  V    EA         ++ GF  Y   +   Q  +   PE  K FV+   + 
Sbjct: 181 WLTVAPGFVRALGEADKTLKTIPWSEYGFEGYGLSLVASQRFVQRHPEVAKKFVKAYQQA 240

Query: 235 WYNYLYGDPSAA----NELIKAANPDMTDDKLAFARNMMKDE 272
             N +  DP+AA     +++   +    +++ A +  +M++E
Sbjct: 241 QKNAI-ADPAAAAAALKKMVAEVDEQQAEEQFAASVPLMQNE 281