Pairwise Alignments

Query, 333 a.a., permease protein of ABC transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 336 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 30/248 (12%)

Query: 9   LAIALVCGASAASAENA--KVVFGTNWLAQAEHGGFYQSVADGTYAACGLDVEIISGGPQ 66
           LA+ L   A  A   +A  K+     W+ QA+  G+Y + A G Y   GLDV I SGGP 
Sbjct: 7   LAVGLTLAALGAGPASALDKLTLQLKWVTQAQFAGYYVAEAKGFYKDEGLDVTIRSGGPD 66

Query: 67  VNNRALMLAGRIDYHMGGDMLQAFNAVKEDIPVVMVAATFQKHPQVILAHPGEA-DSWEE 125
           +N   ++  G  D  +   M  A    ++ +P+V +A  FQK   ++           E+
Sbjct: 67  INPSQVIAGGGADVVLDW-MPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGITKPED 125

Query: 126 LKDLTLLIGDNGFT-SYYQWM---------------IAEHGFTVEQRQPYTFNPAPFIAD 169
            K  TL +   G    ++ WM               I + GF V+   P   N AP I+ 
Sbjct: 126 FKGRTLGVWYGGNEHPFFAWMSKLGYSTSGAHPDVTILKQGFNVD---PILQNQAPCIST 182

Query: 170 KRVGMQGYLSSEPFAVEKEAGFKPNVFLIADAGFSSYATMVETMQATIDE--KPEQVKCF 227
                   +      V+    FK       D G ++       +   +++  K +++   
Sbjct: 183 TTYNEYWQVVDGGIPVDDLLNFK-----YEDQGVATLEDGFWVLAKDLEDPAKVDKLARL 237

Query: 228 VEGSIKGW 235
           V  ++KGW
Sbjct: 238 VRATMKGW 245