Pairwise Alignments

Query, 333 a.a., permease protein of ABC transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 686 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 74.3 bits (181), Expect = 8e-18
 Identities = 86/312 (27%), Positives = 128/312 (41%), Gaps = 29/312 (9%)

Query: 12  ALVCGASAASAENAKVVFGTNWLAQAEHGGFYQSVADGTYAACGLDVEIISGGPQVNNRA 71
           AL     A   ++  +     W  Q +  G+Y ++  G YA  GL V +       +   
Sbjct: 32  ALALAQGAPPPQDEPLHLRLKWKHQFQFAGYYAALEKGFYAGEGLSVVLEEASDSEDAVT 91

Query: 72  LMLAGRIDYHMGGDMLQAFNAVKEDIPVVMVAATFQKHPQVILAHPGEADSWEELKDLTL 131
            +LAG+  Y  G D  +   A     PVV +AA FQ  P+V+LA     DS   L  L  
Sbjct: 92  AVLAGKAQY--GIDSTELLVAYGRGEPVVALAALFQHSPEVLLA---RTDSGITL--LHD 144

Query: 132 LIGDN-----GFTSYYQWMIAEHGFTVEQ----RQPYTFNPAPFIADKRVGMQGYLSSEP 182
           LIG          S   ++ AE G    Q    R P  F+P P +  +   +  Y S EP
Sbjct: 145 LIGRRISLPPASLSLLAYLAAE-GIGANQMTIVRNP--FSPDPLLQGEVDAIGAYSSDEP 201

Query: 183 FAVEKEAGFKPNVFLIADAGFSSYATMVETMQATIDEKPEQVKCFVEGSIKGWYNYLYGD 242
           +++ ++ G    +F    AG   Y  ++ T  A +   P++V+ F   S++GW  Y    
Sbjct: 202 YSLRRQ-GIDFLMFSPRSAGIDLYGDILFTTAAELRSHPDRVRAFRRASLRGW-EYALAH 259

Query: 243 PSAANELIKAANP-DMTDDKLAFARNMMKDEGIVDSGDALEMGIGAINP-DVVADFYAKM 300
           P     LI    P   T D L F    M+    + + D +E G         +AD YA  
Sbjct: 260 PQEIARLIADRYPGQRTIDHLLFEAAAMRQ---LIAADLIEPGYMTRGRWQAIADLYAGF 316

Query: 301 VKAGVIEDGLDI 312
              G+I   LD+
Sbjct: 317 ---GMIGRDLDL 325