Pairwise Alignments

Query, 493 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 516 a.a., putative ATP-dependent RNA helicase RhlE from Phaeobacter inhibens DSM 17395

 Score =  667 bits (1720), Expect = 0.0
 Identities = 363/515 (70%), Positives = 409/515 (79%), Gaps = 27/515 (5%)

Query: 1   MTKFSDLNLDPKVLKAISEAGYDTPTPIQAEAIPPALEGRDVLGIAQTGTGKTASFTLPM 60
           MTKFSDLNL+PKVLKAI EAGY++PTPIQA AIPPALEGRDVLGIAQTGTGKTASFTLPM
Sbjct: 1   MTKFSDLNLNPKVLKAIEEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM 60

Query: 61  ITMLRKGRARARMPRSLVLAPTRELAAQVAENFDIYAKHTKLTKALLIGGVSFKEQDLLI 120
           IT+L +GRARARMPRSLVL PTRELAAQVAENFD Y KH KLTKALLIGGVSFKEQD LI
Sbjct: 61  ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDTLI 120

Query: 121 DKGVDVLIATPGRLLDHFERGKLILTDVKVMVVDEADRMLDMGFIPDIEKIFQLTPFTRQ 180
           DKGVDVLIATPGRLLDHFERGKLIL+DVKVMVVDEADRMLDMGFIPDIE+IF LTPFTRQ
Sbjct: 121 DKGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLTPFTRQ 180

Query: 181 TLFFSATMAPEIERITNTFLSNPARVEVARQSTTSETITQGLVQFKPSRRDRATAFKEKR 240
           TLFFSATMAPEIERITNTFLS PARVEVARQ+TTSE ITQG+V FK SRRDR  +  EKR
Sbjct: 181 TLFFSATMAPEIERITNTFLSAPARVEVARQATTSENITQGVVLFKASRRDREGS--EKR 238

Query: 241 EMLRALIEREGDGCRNAIIFCNRKMDVDVVAKSLIKHGYDAAPIHGDLEQSQRTKTLDQF 300
           ++LR LI++EG+ C NAIIFCNRK DVD+VAKSL K+GYDAAPIHGDL+QSQRTKTL+ F
Sbjct: 239 KLLRHLIDQEGEKCTNAIIFCNRKTDVDIVAKSLKKYGYDAAPIHGDLDQSQRTKTLEGF 298

Query: 301 RDGTLKFLVASDVAARGLDIPNVSHVFNFDVPSHAEDYVHRIGRTGRAGRKGTTLMLAVP 360
           R+G+L+FLVASDVAARGLD+P+VSHVFNFDVPSHAEDYVHRIGRTGRAGR G+ +M+ VP
Sbjct: 299 REGSLRFLVASDVAARGLDVPSVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGSAMMICVP 358

Query: 361 ADDKLLAAIEDLVKLEIPRIEAP---GISAPQGGRSKDEERPEPEKRERRSRRRTKPEPA 417
            D+K L  IE LV+ EIPRIE P     + P+   SKD+   E  +R+ RSRR +    A
Sbjct: 359 KDEKNLEDIERLVQNEIPRIENPLKKAKAEPKAKDSKDDASSETTERKTRSRRPSARSSA 418

Query: 418 ------KANAPAQAPVAAQAET-AVAEAEEAPIPDAVL-----PAARKTETPQ------- 458
                  A+A AQ   A  AE  A A+ ++AP  +        PA  K+  P+       
Sbjct: 419 AKDVNESADAQAQISDAPSAEVDAPAQEQKAPEQEKRASGRGKPAESKSSGPKSGQKGNQ 478

Query: 459 ---RGRKGRARDTGPKQVGLGDHVPDFLLRSFSER 490
              RGR G  R      VG+GDH+P F+  SF+ER
Sbjct: 479 KSGRGRGGNDRGNDRNVVGMGDHMPSFIALSFAER 513