Pairwise Alignments

Query, 493 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 457 a.a., ATP-dependent RNA helicase RhlE from Pantoea sp. MT58

 Score =  321 bits (822), Expect = 4e-92
 Identities = 183/385 (47%), Positives = 242/385 (62%), Gaps = 16/385 (4%)

Query: 4   FSDLNLDPKVLKAISEAGYDTPTPIQAEAIPPALEGRDVLGIAQTGTGKTASFTLPMITM 63
           F  L L   +L+A++E GY  PTPIQ +AIP  L GRD+L  AQTGTGKTA FTLP++  
Sbjct: 3   FDSLGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQK 62

Query: 64  LRKGRA--RARMP-RSLVLAPTRELAAQVAENFDIYAKHTKLTKALLIGGVSFKEQDLLI 120
           L       R R P R+L+L PTRELAAQV EN   Y+K+  L   ++ GGVS   Q + +
Sbjct: 63  LSATATPIRGRRPVRALILTPTRELAAQVGENVSDYSKYLSLRSMVVFGGVSINPQMVKL 122

Query: 121 DKGVDVLIATPGRLLDHFERGKLILTDVKVMVVDEADRMLDMGFIPDIEKIFQLTPFTRQ 180
             GVD+L+ATPGRLLD  ++  + L+ V+V+V+DEADRMLDMGFI DI ++    P  RQ
Sbjct: 123 RGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMGFIHDIRRVLARLPAKRQ 182

Query: 181 TLFFSATMAPEIERITNTFLSNPARVEVARQSTTSETITQGLVQFKPSRRDRATAFKEKR 240
            L FSAT + EI+ +    L+NP  +EVAR++T SE + Q  V F   +R        KR
Sbjct: 183 NLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQ-QVAFVDKKR--------KR 233

Query: 241 EMLRALIEREGDG-CRNAIIFCNRKMDVDVVAKSLIKHGYDAAPIHGDLEQSQRTKTLDQ 299
           E+L  LI   G+G  +  ++F   K   + +A+ L K G  AA IHG+  Q  RT+ L  
Sbjct: 234 ELLSQLI---GEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALAD 290

Query: 300 FRDGTLKFLVASDVAARGLDIPNVSHVFNFDVPSHAEDYVHRIGRTGRAGRKGTTLMLAV 359
           F+ G ++ LVA+D+AARGLDI  + HV N+++P+ AEDYVHRIGRTGRA   G  L L  
Sbjct: 291 FKSGGIRVLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVC 350

Query: 360 PADDKLLAAIEDLVKLEIPRIEAPG 384
             + KLL  IE L+K EIPR+   G
Sbjct: 351 VDEHKLLRDIERLLKREIPRLAVEG 375