Pairwise Alignments

Query, 479 a.a., proton-translocating NADH-quinone oxidoreductase, chain N (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 498 a.a., Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit from Pseudomonas stutzeri RCH2

 Score =  122 bits (307), Expect = 2e-32
 Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 31/376 (8%)

Query: 79  ITILLSAAAILVMSLDHMSKLGILK--------FEYPILIALAVVGMMMMVSAGDLMALY 130
           + +L  A + L+ +L  +  +G L+        F Y  L   A VG+ +   AG+L++  
Sbjct: 80  LALLFVALSSLLWALTTIYAIGYLEDSPLRSRFFGYFSLCVSATVGLAL---AGNLVSFL 136

Query: 131 MGLELQSLALYVVASIHRDDSRSTEAGLKYFVLGALSSGMLLYGASLTYGYAGTTLFSGI 190
           +  EL +LA + +  +HR    S  AG  Y         ++L G +L +  AGT  F   
Sbjct: 137 LFYELLTLATFPLV-VHRGTPESLRAGRVYLAYTVGGGTLVLMGVALLHSLAGTPDFQAA 195

Query: 191 ITTATE-GEISMGLLFGLVFLTAGLAFKVSAAPFHMWTPDVYEGSPTPVTALFATAPKVA 249
                + GE  +GL      L  GL  K +  P H W P     +P PV+AL      V 
Sbjct: 196 GYLLEQVGEHDVGLRVAFALLILGLGVKAALIPLHGWLPQAMV-APAPVSALLHAVAVVK 254

Query: 250 AMAL-FARVVHDAFG-NAIG--DWQQIVAFLAVLSMFLGSIAAIGQTDIKRLMAYSSIAH 305
           A A    RVV+D FG  A+   D  + + +LA  ++  GS+ A+ Q ++K+ +AYS+I+ 
Sbjct: 255 AGAFGIVRVVYDVFGAEALTQLDLTKPLLWLAAATILYGSLRALQQQELKKRLAYSTISQ 314

Query: 306 MGFALMGLAA----GTVGGVQAMLIYMAIYVTMNI--GTFAFILSMEKDGVAVTEIASLN 359
           + +  +G+A       VGG+  ++    + VT+    G FA  L + +       I  ++
Sbjct: 315 VSYVTLGVALLGPIAAVGGLVHLVHQGLMKVTLFYCAGNFAETLGIHR-------IREMD 367

Query: 360 QFASREPTKAMALLLLMFSLAGIPPLLGFFGKYTVLLAAVDGGLTWLAIAGVMASVIGAF 419
               R P    A  +    + GIPP+ GF  K+T+ L A++ G  W+ +  + ++++ A 
Sbjct: 368 GVGRRMPWTMTAFSIGALGMIGIPPIAGFISKWTLGLGALEVGQDWVLLVLLGSALLNAA 427

Query: 420 YYLRIVYYMYFGKADD 435
           Y+L +++  +F +  D
Sbjct: 428 YFLPLLWRGWFAEPAD 443



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 369 AMALLLLMFSL-AGIPPLLGFFGKYTVLLAAVDGGLTWLAIAGVMASVIGAFYYLRIVYY 427
           A ALL+L   + A + PL G+  +  V  A V   L   A+A V A   GAF  +R+VY 
Sbjct: 212 AFALLILGLGVKAALIPLHGWLPQAMVAPAPVSALLH--AVAVVKA---GAFGIVRVVYD 266

Query: 428 MYFGKADDALEGSMPMV 444
           ++  +A   L+ + P++
Sbjct: 267 VFGAEALTQLDLTKPLL 283