Pairwise Alignments

Query, 479 a.a., proton-translocating NADH-quinone oxidoreductase, chain N (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 502 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  141 bits (355), Expect = 6e-38
 Identities = 113/386 (29%), Positives = 189/386 (48%), Gaps = 19/386 (4%)

Query: 109 LIALAVVGMMMMVSAGDLMALYMGLELQSLALYVVASIHRDDSRSTEAGLKYFVLGALSS 168
           L  L + G++ M   GD   L++ LE+ SL+ Y + ++ RD  R+  A   Y +LG + +
Sbjct: 116 LFLLCLTGLLGMAITGDAFNLFVFLEISSLSSYALVALGRD-RRALYAAYHYLILGTVGA 174

Query: 169 GMLLYGASLTYGYAGTTLFSGIITTATEGEISMGLLFGLVFLTAGLAFKVSAAPFHMWTP 228
              + G    Y   GT   + +         S   + G+VFL  GL+ K++  P H W P
Sbjct: 175 TFYVIGIGFLYMMTGTLNMNDLAQRLPAVAHSRTAVAGVVFLGVGLSLKLALFPLHKWLP 234

Query: 229 DVYEGSPTPVTA-LFATAPKVA---AMALFARVVHDAFGNAI----GDWQQIVAFLAVLS 280
             Y  +P+ V A L AT+ KVA    + LF  V+  AF   +       +++V  LA+ +
Sbjct: 235 AAYSYAPSAVGAFLAATSTKVAFYVMVRLFLGVLAPAFSANLLPGPVSAREMVMVLALAA 294

Query: 281 MFLGSIAAIGQTDIKRLMAYSSIAHMGFALMGLAAGTVGGVQAMLIYMAIYVTMNIGTFA 340
           +  GS +AI Q+D KRL+AYSS++ +G  ++GL+  ++ GV   L++M  +  +    F 
Sbjct: 295 ILSGSFSAIFQSDAKRLLAYSSVSQIGVMVLGLSLFSLDGVAGGLVHMLNHALIKASLF- 353

Query: 341 FILSMEKDGVAVTEIASLNQFASREPTKAMALLLLMFSLAGIPPLLGFFGKYTVLLAAVD 400
             L      +   EIA +     R P    A ++   SL GIP   GF  K+ +  +A+ 
Sbjct: 354 MALGCVFLRIGSVEIADMAGIGRRMPWTMAAFVIGGLSLIGIPGTAGFISKWQLAQSAIA 413

Query: 401 GGLTWLAIAGVMASVIGAFYYL-RIVYYMYFGKAD-DALEGSMPMVQYGFLMASAVIMLV 458
            G  WLA+A ++AS + A  Y+ +++   YF  +  ++  G+    Q    M  A + + 
Sbjct: 414 EG-WWLAVAALIASSLLAVVYVGKVIEAAYFRPSPAESPSGAPSAPQEAPAMMLAPLWIA 472

Query: 459 GIVNF-FGVE-----GMALAAAESLV 478
            + N  FG+      G+A  AA +L+
Sbjct: 473 ALANIGFGLNTTWTLGLAKRAASALM 498