Pairwise Alignments

Query, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 429 a.a., NADH-quinone oxidoreductase, F subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  649 bits (1673), Expect = 0.0
 Identities = 314/429 (73%), Positives = 351/429 (81%), Gaps = 1/429 (0%)

Query: 1   MLQDQDRIFTNIYGMHDRTLAGARKRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGF 60
           ML D+DRIFTN+YG  D  LAGARKRG WDGT  ++  GRD I+  MK SGLRGRGGAGF
Sbjct: 1   MLNDKDRIFTNLYGFQDWRLAGARKRGDWDGTGAILAKGRDGIINEMKASGLRGRGGAGF 60

Query: 61  PTGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHA 120
           PTGLKWSFMPK+   RPHYLVVNADE EPGTCKDR++MR DPH LIEGCLIA FAMGAH 
Sbjct: 61  PTGLKWSFMPKDIGERPHYLVVNADEGEPGTCKDRDMMRFDPHKLIEGCLIAGFAMGAHV 120

Query: 121 SYIYIRGEYIREREALQAAIDEAYEAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALI 180
           +YIYIRGE+ RE E L+ AI EA EAGLLG NA GSGWD ++Y+  GAGAYICGEETALI
Sbjct: 121 AYIYIRGEFFREAEHLEFAIAEAREAGLLGPNACGSGWDMEVYVHRGAGAYICGEETALI 180

Query: 181 ESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAQFGRPNNAGT 240
           +SLEGKKG PR+KPPFPAG GLYGCPTTVNNVESIAV PTILRRG  WFA  GR NN GT
Sbjct: 181 QSLEGKKGQPRLKPPFPAGVGLYGCPTTVNNVESIAVAPTILRRGGAWFAGLGRENNTGT 240

Query: 241 KLFAISGHVNQPCVVEEAMSISFEELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMR 300
           K+F ISGHVN+PC VEE M I   ELIDKH GG+RGGWDNL  VIPGG+SVP +  E   
Sbjct: 241 KVFCISGHVNKPCNVEEEMGIPLRELIDKHAGGVRGGWDNLLGVIPGGASVPVLPRELCD 300

Query: 301 DAIMDFDYLRGELGSGLGTAAVIVMDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWM 360
           D +MDFD L+  + SGLGTAAV+VMD+STDI++AI RLSAFY HESCGQCTPCREGTGW+
Sbjct: 301 DVLMDFDSLKA-VKSGLGTAAVMVMDKSTDIVRAIARLSAFYTHESCGQCTPCREGTGWL 359

Query: 361 MRVMDRLVRGEAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEIEDRIKA 420
            RVM RLV G+A +EEID+L  VT+Q+EGHTICALGDAAAWPIQGLIR+FR EIE RI  
Sbjct: 360 SRVMTRLVNGDAAIEEIDVLEQVTRQIEGHTICALGDAAAWPIQGLIRHFRPEIERRIIE 419

Query: 421 QKTGRVTAA 429
           ++ GR  AA
Sbjct: 420 KRGGRSVAA 428