Pairwise Alignments

Query, 433 a.a., NADH-quinone oxidoreductase, F subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 512 a.a., NADH dehydrogenase (quinone) from Marinobacter adhaerens HP15

 Score =  279 bits (714), Expect = 1e-79
 Identities = 160/414 (38%), Positives = 239/414 (57%), Gaps = 4/414 (0%)

Query: 2   LQDQDRIFTNIYGMHDR-TLAGARKRGHWDGTDKLIQMGRDDIVKIMKDSGLRGRGGAGF 60
           L+ Q R+  +  G+ D  ++A  R  G + G ++ + +    IV  +K SGLRGRGGA F
Sbjct: 100 LKLQQRLTFSRIGITDPLSIADYRSHGGFVGLEQAVSLSPQAIVDEVKASGLRGRGGAAF 159

Query: 61  PTGLKWSFMPKESDGRPHYLVVNADESEPGTCKDREIMRHDPHTLIEGCLIASFAMGAHA 120
           PTG+KW  +  E   +  Y+V NADE + GT  DR  M  DP+ LIEG  IA  A+GA  
Sbjct: 160 PTGIKWQTVHDEPWQQQKYIVCNADEGDSGTFADRLAMECDPYMLIEGMTIAGLAVGATQ 219

Query: 121 SYIYIRGEYIREREALQAAIDEAYEAGLLGKNAAGSGWDFDLYLTHGAGAYICGEETALI 180
            +IY+R EY      L  AI  A   G LG++  GSG  F+L +   AGAYICGEET+L+
Sbjct: 220 GFIYLRSEYPVAHRILNEAISRAEAEGYLGRDVRGSGRAFNLEVRLAAGAYICGEETSLL 279

Query: 181 ESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGADWFAQFGRPNNAGT 240
           ESLEGK+G+ R KPP PA  GL+G PT VNNV S A VP IL +G   +A +G   + GT
Sbjct: 280 ESLEGKRGLVRAKPPLPAIKGLFGQPTVVNNVLSFAAVPFILAKGGQTYAHYGMGKSRGT 339

Query: 241 KLFAISGHVNQPCVVEEAMSISFEELIDKHCGGIRGGWDNLKAVIPGGSSVPCVRGENMR 300
               ++G++ +  ++E A  +S  E+++   GG   G   +KAV  GG  +     +N  
Sbjct: 340 LPIQLAGNIRRGGLIELAFGVSLREILEDFGGGTFTG-RPMKAVQVGG-PLMAYMPQNQW 397

Query: 301 DAIMDFDYLRGELGSGLGTAAVIVMDQSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWM 360
           D  MD++    +LG+G+G   V+V D + D+ +       F   ESCG+CTPCR G+   
Sbjct: 398 DTPMDYEAF-AQLGAGIGHGGVVVFDDTVDMGEQARFAMEFCTVESCGKCTPCRIGSVRG 456

Query: 361 MRVMDRLVRGEAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFRDEI 414
           + V+DR+  GE+    + +L ++ + +   ++CA+G    +P+Q +++ F D++
Sbjct: 457 LEVIDRIRAGESPEANLVLLEELCETMVDGSLCAMGGMTPFPVQSVMKYFPDDL 510