Pairwise Alignments

Query, 202 a.a., OmpW family protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 218 a.a., outer membrane protein W (RefSeq) from Shewanella sp. ANA-3

 Score =  127 bits (318), Expect = 2e-34
 Identities = 85/218 (38%), Positives = 118/218 (54%), Gaps = 20/218 (9%)

Query: 2   KTHLLTTAAALVLTS--AAPALAQSAGDWTFGVGIINVNPDSDNGSVVDGTL-DVEVGSD 58
           KT + T  AA +L +  +A   A  AGD     G + V P+  + +V+  TL +  V +D
Sbjct: 4   KTTVSTLIAATLLAAGFSASVSAHQAGDIIVRAGAVTVAPNESSANVL--TLGEFSVDND 61

Query: 59  TQLSLTAEYFFTDNIGLEILAATPFTHDIDV---GDGAVTGETKHLPPTVSVNYHFTQF- 114
           TQL L   Y  TDN G+E+LAATPF+H + +   G G +  ETK LPPT+   Y+F    
Sbjct: 62  TQLGLNFGYMLTDNFGIELLAATPFSHSVSLPAPGVGEI-AETKQLPPTLVAQYYFGDAQ 120

Query: 115 SGFKPYVGVGINYTNFFEEKSSA-------GTLELDDSWGLAAQIGVDIPVTERGALRLN 167
           S  +PYVGVG+NYTNFF+   +A         L +  SWGLAAQ+G+D  V +   +  +
Sbjct: 121 SKLRPYVGVGVNYTNFFDNDFNAHGKSLGLSNLSMSTSWGLAAQVGLDYQVNKNWLVNAS 180

Query: 168 ARYIDIETDAKLN-GAD--IGTVKIDPVVLNVAYVFTF 202
             Y  I TD K   G D  +    I+P V  V+  +TF
Sbjct: 181 VWYAQISTDVKFTAGTDQYVFDTDINPWVYMVSVGYTF 218